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TENM4 (teneurin transmembrane protein 4)

Identity

Alias_namesODZ4
odz, odd Oz/ten-m homolog 4 (Drosophila)
Alias_symbol (synonym)KIAA1302
Ten-M4
Other aliasDoc4
ETM5
TEN4
TNM4
ten-4
HGNC (Hugo) TENM4
LocusID (NCBI) 26011
Atlas_Id 41605
Location 11q14.1  [Link to chromosome band 11q14]
Location_base_pair Starts at 78653283 and ends at 79440651 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
C2CD3 (11q13.4) / TENM4 (11q14.1)DLEC1 (3p22.2) / TENM4 (11q14.1)ELL3 (15q15.3) / TENM4 (11q14.1)
GAB2 (11q14.1) / TENM4 (11q14.1)KIF13B (8p12) / TENM4 (11q14.1)MTCH2 (11p11.2) / TENM4 (11q14.1)
POLD3 (11q13.4) / TENM4 (11q14.1)RSF1 (11q14.1) / TENM4 (11q14.1)TENM4 (11q14.1) / CADM1 (11q23.3)
TENM4 (11q14.1) / CALR (19p13.2)TENM4 (11q14.1) / DLEC1 (3p22.2)TENM4 (11q14.1) / GRIK4 (11q23.3)
TENM4 (11q14.1) / INTS4 (11q14.1)TENM4 (11q14.1) / NRG1 (8p12)TENM4 (11q14.1) / RBM4 (11q13.2)
TENM4 (11q14.1) / TMTC2 (12q21.31)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Leukemias implicated (Data extracted from papers in the Atlas)

Leukemias TL_t1111q14q23ID3250


Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 14 ]

Solid Tumors TT_t0311p22q14ID105576 TT_t0311p22q14ID105578 TT_t0811p12q14ID107816 TT_t0811p12q14ID107817 TT_t1111p11q14ID100491
TT_t1111q13q14ID100744 TT_t1111q13q14ID100759 TT_t1111q13q14ID100763 TT_t1111q13q14ID100764 TT_t1111q14q14ID100794
TT_t1111q14q14ID100808 TT_t1111q14q14ID100811 TT_t1111q14q23ID100817 TT_t1112q14q21ID100896


External links

Nomenclature
HGNC (Hugo)TENM4   29945
Cards
Entrez_Gene (NCBI)TENM4  26011  teneurin transmembrane protein 4
AliasesDoc4; ETM5; ODZ4; TEN4; 
TNM4; Ten-M4; ten-4
GeneCards (Weizmann)TENM4
Ensembl hg19 (Hinxton)ENSG00000149256 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000149256 [Gene_View]  ENSG00000149256 [Sequence]  chr11:78653283-79440651 [Contig_View]  TENM4 [Vega]
ICGC DataPortalENSG00000149256
TCGA cBioPortalTENM4
AceView (NCBI)TENM4
Genatlas (Paris)TENM4
WikiGenes26011
SOURCE (Princeton)TENM4
Genetics Home Reference (NIH)TENM4
Genomic and cartography
GoldenPath hg38 (UCSC)TENM4  -     chr11:78653283-79440651 -  11q14.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TENM4  -     11q14.1   [Description]    (hg19-Feb_2009)
GoldenPathTENM4 - 11q14.1 [CytoView hg19]  TENM4 - 11q14.1 [CytoView hg38]
ImmunoBaseENSG00000149256
Mapping of homologs : NCBITENM4 [Mapview hg19]  TENM4 [Mapview hg38]
OMIM610084   616736   
Gene and transcription
Genbank (Entrez)AB037723 AK023935 AK056531 AK127101 AK127705
RefSeq transcript (Entrez)NM_001098816
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TENM4
Alternative Splicing GalleryENSG00000149256
Gene ExpressionTENM4 [ NCBI-GEO ]   TENM4 [ EBI - ARRAY_EXPRESS ]   TENM4 [ SEEK ]   TENM4 [ MEM ]
Gene Expression Viewer (FireBrowse)TENM4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)26011
GTEX Portal (Tissue expression)TENM4
Human Protein AtlasENSG00000149256-TENM4 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TENM4
DMDM Disease mutations26011
Blocks (Seattle)TENM4
Human Protein Atlas [tissue]ENSG00000149256-TENM4 [tissue]
IPIIPI00737429   IPI00985392   IPI00983352   IPI00984270   
Protein Interaction databases
FunCoupENSG00000149256
BioGRIDTENM4
STRING (EMBL)TENM4
ZODIACTENM4
Ontologies - Pathways
Huge Navigator TENM4 [HugePedia]
snp3D : Map Gene to Disease26011
BioCentury BCIQTENM4
ClinGenTENM4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26011
Chemical/Pharm GKB GenePA134896466
Clinical trialTENM4
Miscellaneous
canSAR (ICR)TENM4 (select the gene name)
DataMed IndexTENM4
Probes
Litterature
PubMed23 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTENM4
EVEXTENM4
GoPubMedTENM4
iHOPTENM4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Feb 19 17:12:35 CET 2020

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