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TENT2 (terminal nucleotidyltransferase 2)

Identity

Alias (NCBI)APD4
GLD2
PAPD4
TUT2
HGNC (Hugo) TENT2
LocusID (NCBI) 167153
Atlas_Id 80489
Location 5q14.1  [Link to chromosome band 5q14]
Location_base_pair Starts at 79612441 and ends at 79688245 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

 

Nomenclature
HGNC (Hugo)TENT2   26776
Cards
Entrez_Gene (NCBI)TENT2    terminal nucleotidyltransferase 2
AliasesAPD4; GLD2; PAPD4; TUT2
GeneCards (Weizmann)TENT2
Ensembl hg19 (Hinxton)ENSG00000164329 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000164329 [Gene_View]  ENSG00000164329 [Sequence]  chr5:79612441-79688245 [Contig_View]  TENT2 [Vega]
ICGC DataPortalENSG00000164329
TCGA cBioPortalTENT2
AceView (NCBI)TENT2
Genatlas (Paris)TENT2
SOURCE (Princeton)TENT2
Genetics Home Reference (NIH)TENT2
Genomic and cartography
GoldenPath hg38 (UCSC)TENT2  -     chr5:79612441-79688245 +  5q14.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TENT2  -     5q14.1   [Description]    (hg19-Feb_2009)
GoldenPathTENT2 - 5q14.1 [CytoView hg19]  TENT2 - 5q14.1 [CytoView hg38]
ImmunoBaseENSG00000164329
Genome Data Viewer NCBITENT2 [Mapview hg19]  
OMIM614121   
Gene and transcription
Genbank (Entrez)AK095818 AL833136 AW302247 BC026061 BC047581
RefSeq transcript (Entrez)NM_001114393 NM_001114394 NM_001297744 NM_001297745 NM_001349548 NM_001349549 NM_001349550 NM_001349551 NM_001349552 NM_001349553 NM_001349554 NM_001388093 NM_001388094 NM_001388095 NM_001388096 NM_001388097 NM_001388098 NM_001388099 NM_001388100 NM_001388101 NM_001388102 NM_001388103 NM_001388105 NM_001388106 NM_001388107 NM_001388108 NM_001388109 NM_001388110 NM_001388111 NM_001388112 NM_001388113 NM_001388114 NM_001388115 NM_001388116 NM_001388117 NM_001388118 NM_001388119 NM_001388120 NM_001388121 NM_001388122 NM_001388123 NM_001388124 NM_001388125 NM_001388126 NM_001388127 NM_001388128 NM_001388129 NM_001388130 NM_001388131 NM_001388132 NM_001388133 NM_001388134 NM_001388135 NM_001388136 NM_001388137 NM_173797
Consensus coding sequences : CCDS (NCBI)TENT2
Gene ExpressionTENT2 [ NCBI-GEO ]   TENT2 [ EBI - ARRAY_EXPRESS ]   TENT2 [ SEEK ]   TENT2 [ MEM ]
Gene Expression Viewer (FireBrowse)TENT2 [ Firebrowse - Broad ]
GenevisibleExpression of TENT2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)167153
GTEX Portal (Tissue expression)TENT2
Human Protein AtlasENSG00000164329-TENT2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6PIY7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6PIY7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6PIY7
PhosPhoSitePlusQ6PIY7
Domains : Interpro (EBI)NT_sf    PAP_assoc   
Domain families : Pfam (Sanger)PAP_assoc (PF03828)   
Domain families : Pfam (NCBI)pfam03828   
Conserved Domain (NCBI)TENT2
SuperfamilyQ6PIY7
AlphaFold pdb e-kbQ6PIY7   
Human Protein Atlas [tissue]ENSG00000164329-TENT2 [tissue]
Protein Interaction databases
DIP (DOE-UCLA)Q6PIY7
IntAct (EBI)Q6PIY7
BioGRIDTENT2
STRING (EMBL)TENT2
ZODIACTENT2
Ontologies - Pathways
QuickGOQ6PIY7
Ontology : AmiGOhematopoietic progenitor cell differentiation  polynucleotide adenylyltransferase activity  polynucleotide adenylyltransferase activity  protein binding  ATP binding  cytosol  mRNA polyadenylation  nucleotidyltransferase activity  hippocampus development  neuron differentiation  RNA 3'-end processing  nuclear RNA-directed RNA polymerase complex  5'-3' RNA polymerase activity  RNA stabilization  RNA polyadenylation  metal ion binding  retina development in camera-type eye  adenylyltransferase activity  histone mRNA catabolic process  dark adaptation  negative regulation of miRNA catabolic process  
Ontology : EGO-EBIhematopoietic progenitor cell differentiation  polynucleotide adenylyltransferase activity  polynucleotide adenylyltransferase activity  protein binding  ATP binding  cytosol  mRNA polyadenylation  nucleotidyltransferase activity  hippocampus development  neuron differentiation  RNA 3'-end processing  nuclear RNA-directed RNA polymerase complex  5'-3' RNA polymerase activity  RNA stabilization  RNA polyadenylation  metal ion binding  retina development in camera-type eye  adenylyltransferase activity  histone mRNA catabolic process  dark adaptation  negative regulation of miRNA catabolic process  
NDEx NetworkTENT2
Atlas of Cancer Signalling NetworkTENT2
Wikipedia pathwaysTENT2
Orthology - Evolution
OrthoDB167153
GeneTree (enSembl)ENSG00000164329
Phylogenetic Trees/Animal Genes : TreeFamTENT2
Homologs : HomoloGeneTENT2
Homology/Alignments : Family Browser (UCSC)TENT2
Gene fusions - Rearrangements
Fusion : QuiverTENT2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTENT2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TENT2
dbVarTENT2
ClinVarTENT2
MonarchTENT2
1000_GenomesTENT2 
Exome Variant ServerTENT2
GNOMAD BrowserENSG00000164329
Varsome BrowserTENT2
ACMGTENT2 variants
VarityQ6PIY7
Genomic Variants (DGV)TENT2 [DGVbeta]
DECIPHERTENT2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTENT2 
Mutations
ICGC Data PortalTENT2 
TCGA Data PortalTENT2 
Broad Tumor PortalTENT2
OASIS PortalTENT2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTENT2  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTENT2
Mutations and Diseases : HGMDTENT2
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTENT2
DgiDB (Drug Gene Interaction Database)TENT2
DoCM (Curated mutations)TENT2
CIViC (Clinical Interpretations of Variants in Cancer)TENT2
Cancer3DTENT2
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614121   
Orphanet
DisGeNETTENT2
MedgenTENT2
Genetic Testing Registry TENT2
NextProtQ6PIY7 [Medical]
GENETestsTENT2
Target ValidationTENT2
Huge Navigator TENT2 [HugePedia]
ClinGenTENT2
Clinical trials, drugs, therapy
MyCancerGenomeTENT2
Protein Interactions : CTDTENT2
Pharm GKB GenePA134918975
PharosQ6PIY7
Clinical trialTENT2
Miscellaneous
canSAR (ICR)TENT2
HarmonizomeTENT2
DataMed IndexTENT2
Probes
Litterature
PubMed35 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTENT2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:25:12 CEST 2021

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