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TENT5A (terminal nucleotidyltransferase 5A)

Identity

Alias (NCBI)C6orf37
FAM46A
OI18
XTP11
HGNC (Hugo) TENT5A
HGNC Alias symbFLJ20037
HGNC Previous nameC6orf37
 FAM46A
HGNC Previous namechromosome 6 open reading frame 37
 family with sequence similarity 46 member A
LocusID (NCBI) 55603
Atlas_Id 57547
Location 6q14.1  [Link to chromosome band 6q14]
Location_base_pair Starts at 81745730 and ends at 81752681 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

 

Nomenclature
HGNC (Hugo)TENT5A   18345
Cards
Entrez_Gene (NCBI)TENT5A    terminal nucleotidyltransferase 5A
AliasesC6orf37; FAM46A; OI18; XTP11
GeneCards (Weizmann)TENT5A
Ensembl hg19 (Hinxton)ENSG00000112773 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000112773 [Gene_View]  ENSG00000112773 [Sequence]  chr6:81745730-81752681 [Contig_View]  TENT5A [Vega]
ICGC DataPortalENSG00000112773
TCGA cBioPortalTENT5A
AceView (NCBI)TENT5A
Genatlas (Paris)TENT5A
SOURCE (Princeton)TENT5A
Genetics Home Reference (NIH)TENT5A
Genomic and cartography
GoldenPath hg38 (UCSC)TENT5A  -     chr6:81745730-81752681 -  6q14.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TENT5A  -     6q14.1   [Description]    (hg19-Feb_2009)
GoldenPathTENT5A - 6q14.1 [CytoView hg19]  TENT5A - 6q14.1 [CytoView hg38]
ImmunoBaseENSG00000112773
Genome Data Viewer NCBITENT5A [Mapview hg19]  
OMIM611357   617952   
Gene and transcription
Genbank (Entrez)AF350451 AI131001 AJ420583 AJ420591 AJ420592
RefSeq transcript (Entrez)NM_017633
Consensus coding sequences : CCDS (NCBI)TENT5A
Gene ExpressionTENT5A [ NCBI-GEO ]   TENT5A [ EBI - ARRAY_EXPRESS ]   TENT5A [ SEEK ]   TENT5A [ MEM ]
Gene Expression Viewer (FireBrowse)TENT5A [ Firebrowse - Broad ]
GenevisibleExpression of TENT5A in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55603
GTEX Portal (Tissue expression)TENT5A
Human Protein AtlasENSG00000112773-TENT5A [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96IP4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96IP4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96IP4
PhosPhoSitePlusQ96IP4
Domains : Interpro (EBI)TET5   
Domain families : Pfam (Sanger)NTP_transf_7 (PF07984)   
Domain families : Pfam (NCBI)pfam07984   
Domain families : Smart (EMBL)DUF1693 (SM01153)  
Conserved Domain (NCBI)TENT5A
SuperfamilyQ96IP4
AlphaFold pdb e-kbQ96IP4   
Human Protein Atlas [tissue]ENSG00000112773-TENT5A [tissue]
Protein Interaction databases
DIP (DOE-UCLA)Q96IP4
IntAct (EBI)Q96IP4
BioGRIDTENT5A
STRING (EMBL)TENT5A
ZODIACTENT5A
Ontologies - Pathways
QuickGOQ96IP4
Ontology : AmiGORNA binding  protein binding  response to bacterium  mRNA stabilization  RNA adenylyltransferase activity  
Ontology : EGO-EBIRNA binding  protein binding  response to bacterium  mRNA stabilization  RNA adenylyltransferase activity  
NDEx NetworkTENT5A
Atlas of Cancer Signalling NetworkTENT5A
Wikipedia pathwaysTENT5A
Orthology - Evolution
OrthoDB55603
GeneTree (enSembl)ENSG00000112773
Phylogenetic Trees/Animal Genes : TreeFamTENT5A
Homologs : HomoloGeneTENT5A
Homology/Alignments : Family Browser (UCSC)TENT5A
Gene fusions - Rearrangements
Fusion : QuiverTENT5A
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTENT5A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TENT5A
dbVarTENT5A
ClinVarTENT5A
MonarchTENT5A
1000_GenomesTENT5A 
Exome Variant ServerTENT5A
GNOMAD BrowserENSG00000112773
Varsome BrowserTENT5A
ACMGTENT5A variants
VarityQ96IP4
Genomic Variants (DGV)TENT5A [DGVbeta]
DECIPHERTENT5A [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTENT5A 
Mutations
ICGC Data PortalTENT5A 
TCGA Data PortalTENT5A 
Broad Tumor PortalTENT5A
OASIS PortalTENT5A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTENT5A  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTENT5A
Mutations and Diseases : HGMDTENT5A
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTENT5A
DgiDB (Drug Gene Interaction Database)TENT5A
DoCM (Curated mutations)TENT5A
CIViC (Clinical Interpretations of Variants in Cancer)TENT5A
Cancer3DTENT5A
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611357    617952   
Orphanet
DisGeNETTENT5A
MedgenTENT5A
Genetic Testing Registry TENT5A
NextProtQ96IP4 [Medical]
GENETestsTENT5A
Target ValidationTENT5A
Huge Navigator TENT5A [HugePedia]
ClinGenTENT5A
Clinical trials, drugs, therapy
MyCancerGenomeTENT5A
Protein Interactions : CTDTENT5A
Pharm GKB GenePA38531
PharosQ96IP4
Clinical trialTENT5A
Miscellaneous
canSAR (ICR)TENT5A
HarmonizomeTENT5A
DataMed IndexTENT5A
Probes
Litterature
PubMed36 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTENT5A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:34:46 CEST 2021

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