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TEPP (testis, prostate and placenta expressed)

Identity

Alias (NCBI)-
HGNC (Hugo) TEPP
LocusID (NCBI) 374739
Atlas_Id 74623
Location 16q21  [Link to chromosome band 16q21]
Location_base_pair Starts at 57976435 and ends at 57988113 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TEPP   33745
Cards
Entrez_Gene (NCBI)TEPP    testis, prostate and placenta expressed
Aliases
GeneCards (Weizmann)TEPP
Ensembl hg19 (Hinxton)ENSG00000159648 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000159648 [Gene_View]  ENSG00000159648 [Sequence]  chr16:57976435-57988113 [Contig_View]  TEPP [Vega]
ICGC DataPortalENSG00000159648
TCGA cBioPortalTEPP
AceView (NCBI)TEPP
Genatlas (Paris)TEPP
SOURCE (Princeton)TEPP
Genetics Home Reference (NIH)TEPP
Genomic and cartography
GoldenPath hg38 (UCSC)TEPP  -     chr16:57976435-57988113 +  16q21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TEPP  -     16q21   [Description]    (hg19-Feb_2009)
GoldenPathTEPP - 16q21 [CytoView hg19]  TEPP - 16q21 [CytoView hg38]
ImmunoBaseENSG00000159648
Genome Data Viewer NCBITEPP [Mapview hg19]  
OMIM610264   
Gene and transcription
Genbank (Entrez)AY363222 AY363223 BC104458 BC104459 BF980073
RefSeq transcript (Entrez)NM_199046 NM_199456
Consensus coding sequences : CCDS (NCBI)TEPP
Gene ExpressionTEPP [ NCBI-GEO ]   TEPP [ EBI - ARRAY_EXPRESS ]   TEPP [ SEEK ]   TEPP [ MEM ]
Gene Expression Viewer (FireBrowse)TEPP [ Firebrowse - Broad ]
GenevisibleExpression of TEPP in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)374739
GTEX Portal (Tissue expression)TEPP
Human Protein AtlasENSG00000159648-TEPP [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6URK8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6URK8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6URK8
PhosPhoSitePlusQ6URK8
Domains : Interpro (EBI)TEPP   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TEPP
SuperfamilyQ6URK8
AlphaFold pdb e-kbQ6URK8   
Human Protein Atlas [tissue]ENSG00000159648-TEPP [tissue]
HPRD15486
Protein Interaction databases
DIP (DOE-UCLA)Q6URK8
IntAct (EBI)Q6URK8
BioGRIDTEPP
STRING (EMBL)TEPP
ZODIACTEPP
Ontologies - Pathways
QuickGOQ6URK8
Ontology : AmiGOextracellular region  
Ontology : EGO-EBIextracellular region  
NDEx NetworkTEPP
Atlas of Cancer Signalling NetworkTEPP
Wikipedia pathwaysTEPP
Orthology - Evolution
OrthoDB374739
GeneTree (enSembl)ENSG00000159648
Phylogenetic Trees/Animal Genes : TreeFamTEPP
Homologs : HomoloGeneTEPP
Homology/Alignments : Family Browser (UCSC)TEPP
Gene fusions - Rearrangements
Fusion : QuiverTEPP
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTEPP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TEPP
dbVarTEPP
ClinVarTEPP
MonarchTEPP
1000_GenomesTEPP 
Exome Variant ServerTEPP
GNOMAD BrowserENSG00000159648
Varsome BrowserTEPP
ACMGTEPP variants
VarityQ6URK8
Genomic Variants (DGV)TEPP [DGVbeta]
DECIPHERTEPP [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTEPP 
Mutations
ICGC Data PortalTEPP 
TCGA Data PortalTEPP 
Broad Tumor PortalTEPP
OASIS PortalTEPP [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTEPP  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTEPP
Mutations and Diseases : HGMDTEPP
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTEPP
DgiDB (Drug Gene Interaction Database)TEPP
DoCM (Curated mutations)TEPP
CIViC (Clinical Interpretations of Variants in Cancer)TEPP
Cancer3DTEPP
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610264   
Orphanet
DisGeNETTEPP
MedgenTEPP
Genetic Testing Registry TEPP
NextProtQ6URK8 [Medical]
GENETestsTEPP
Target ValidationTEPP
Huge Navigator TEPP [HugePedia]
ClinGenTEPP
Clinical trials, drugs, therapy
MyCancerGenomeTEPP
Protein Interactions : CTDTEPP
Pharm GKB GenePA165450719
PharosQ6URK8
Clinical trialTEPP
Miscellaneous
canSAR (ICR)TEPP
HarmonizomeTEPP
DataMed IndexTEPP
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTEPP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:25:12 CEST 2021

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