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TEPP (testis, prostate and placenta expressed)

Identity

Other alias-
HGNC (Hugo) TEPP
LocusID (NCBI) 374739
Atlas_Id 74623
Location 16q21  [Link to chromosome band 16q21]
Location_base_pair Starts at 57976435 and ends at 57988113 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TEPP   33745
Cards
Entrez_Gene (NCBI)TEPP  374739  testis, prostate and placenta expressed
Aliases
GeneCards (Weizmann)TEPP
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr16:57976435-57988113 [Contig_View]  TEPP [Vega]
TCGA cBioPortalTEPP
AceView (NCBI)TEPP
Genatlas (Paris)TEPP
WikiGenes374739
SOURCE (Princeton)TEPP
Genetics Home Reference (NIH)TEPP
Genomic and cartography
GoldenPath hg38 (UCSC)TEPP  -     chr16:57976435-57988113 +  16q21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TEPP  -     16q21   [Description]    (hg19-Feb_2009)
EnsemblTEPP - 16q21 [CytoView hg19]  TEPP - 16q21 [CytoView hg38]
Mapping of homologs : NCBITEPP [Mapview hg19]  TEPP [Mapview hg38]
OMIM610264   
Gene and transcription
Genbank (Entrez)AY363222 AY363223 BC104458 BC104459 BF980073
RefSeq transcript (Entrez)NM_199046 NM_199456
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TEPP
Cluster EST : UnigeneHs.132976 [ NCBI ]
CGAP (NCI)Hs.132976
Gene ExpressionTEPP [ NCBI-GEO ]   TEPP [ EBI - ARRAY_EXPRESS ]   TEPP [ SEEK ]   TEPP [ MEM ]
Gene Expression Viewer (FireBrowse)TEPP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)374739
GTEX Portal (Tissue expression)TEPP
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6URK8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6URK8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6URK8
Splice isoforms : SwissVarQ6URK8
PhosPhoSitePlusQ6URK8
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TEPP
DMDM Disease mutations374739
Blocks (Seattle)TEPP
SuperfamilyQ6URK8
Peptide AtlasQ6URK8
HPRD15486
IPIIPI00399363   IPI00397349   
Protein Interaction databases
DIP (DOE-UCLA)Q6URK8
IntAct (EBI)Q6URK8
BioGRIDTEPP
STRING (EMBL)TEPP
ZODIACTEPP
Ontologies - Pathways
QuickGOQ6URK8
Ontology : AmiGOextracellular region  
Ontology : EGO-EBIextracellular region  
NDEx NetworkTEPP
Atlas of Cancer Signalling NetworkTEPP
Wikipedia pathwaysTEPP
Orthology - Evolution
OrthoDB374739
Phylogenetic Trees/Animal Genes : TreeFamTEPP
HOVERGENQ6URK8
HOGENOMQ6URK8
Homologs : HomoloGeneTEPP
Homology/Alignments : Family Browser (UCSC)TEPP
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTEPP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TEPP
dbVarTEPP
ClinVarTEPP
1000_GenomesTEPP 
Exome Variant ServerTEPP
ExAC (Exome Aggregation Consortium)TEPP (select the gene name)
Genetic variants : HAPMAP374739
Genomic Variants (DGV)TEPP [DGVbeta]
DECIPHERTEPP [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTEPP 
Mutations
ICGC Data PortalTEPP 
TCGA Data PortalTEPP 
Broad Tumor PortalTEPP
OASIS PortalTEPP [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTEPP  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTEPP
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TEPP
DgiDB (Drug Gene Interaction Database)TEPP
DoCM (Curated mutations)TEPP (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TEPP (select a term)
intoGenTEPP
Cancer3DTEPP(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610264   
Orphanet
MedgenTEPP
Genetic Testing Registry TEPP
NextProtQ6URK8 [Medical]
TSGene374739
GENETestsTEPP
Target ValidationTEPP
Huge Navigator TEPP [HugePedia]
snp3D : Map Gene to Disease374739
BioCentury BCIQTEPP
ClinGenTEPP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD374739
Chemical/Pharm GKB GenePA165450719
Clinical trialTEPP
Miscellaneous
canSAR (ICR)TEPP (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTEPP
EVEXTEPP
GoPubMedTEPP
iHOPTEPP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Sep 18 13:41:15 CEST 2017

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