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TEPSIN (TEPSIN adaptor related protein complex 4 accessory protein)

Identity

Alias (NCBI)C17orf56
ENTHD2
HGNC (Hugo) TEPSIN
HGNC Alias symbFLJ31528
HGNC Alias nameAP-4 accessory protein
HGNC Previous nameC17orf56
 ENTHD2
HGNC Previous namechromosome 17 open reading frame 56
 ENTH domain containing 2
LocusID (NCBI) 146705
Atlas_Id 78374
Location 17q25.3  [Link to chromosome band 17q25]
Location_base_pair Starts at 81228277 and ends at 81239055 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TEPSIN   26458
Cards
Entrez_Gene (NCBI)TEPSIN    TEPSIN adaptor related protein complex 4 accessory protein
AliasesC17orf56; ENTHD2
GeneCards (Weizmann)TEPSIN
Ensembl hg19 (Hinxton)ENSG00000167302 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000167302 [Gene_View]  ENSG00000167302 [Sequence]  chr17:81228277-81239055 [Contig_View]  TEPSIN [Vega]
ICGC DataPortalENSG00000167302
TCGA cBioPortalTEPSIN
AceView (NCBI)TEPSIN
Genatlas (Paris)TEPSIN
SOURCE (Princeton)TEPSIN
Genetics Home Reference (NIH)TEPSIN
Genomic and cartography
GoldenPath hg38 (UCSC)TEPSIN  -     chr17:81228277-81239055 -  17q25.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TEPSIN  -     17q25.3   [Description]    (hg19-Feb_2009)
GoldenPathTEPSIN - 17q25.3 [CytoView hg19]  TEPSIN - 17q25.3 [CytoView hg38]
ImmunoBaseENSG00000167302
Genome Data Viewer NCBITEPSIN [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK056090 AK127221 AK128728 BC037231 BC042155
RefSeq transcript (Entrez)NM_001363764 NM_144679
Consensus coding sequences : CCDS (NCBI)TEPSIN
Gene ExpressionTEPSIN [ NCBI-GEO ]   TEPSIN [ EBI - ARRAY_EXPRESS ]   TEPSIN [ SEEK ]   TEPSIN [ MEM ]
Gene Expression Viewer (FireBrowse)TEPSIN [ Firebrowse - Broad ]
GenevisibleExpression of TEPSIN in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)146705
GTEX Portal (Tissue expression)TEPSIN
Human Protein AtlasENSG00000167302-TEPSIN [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96N21   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96N21  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96N21
PhosPhoSitePlusQ96N21
Domains : Interpro (EBI)ENTH    ENTH_VHS    TEPSIN   
Domain families : Pfam (Sanger)ENTH (PF01417)   
Domain families : Pfam (NCBI)pfam01417   
Conserved Domain (NCBI)TEPSIN
PDB (RSDB)5WF9    5WFB   
PDB Europe5WF9    5WFB   
PDB (PDBSum)5WF9    5WFB   
PDB (IMB)5WF9    5WFB   
Structural Biology KnowledgeBase5WF9    5WFB   
SCOP (Structural Classification of Proteins)5WF9    5WFB   
CATH (Classification of proteins structures)5WF9    5WFB   
SuperfamilyQ96N21
AlphaFold pdb e-kbQ96N21   
Human Protein Atlas [tissue]ENSG00000167302-TEPSIN [tissue]
HPRD08103
Protein Interaction databases
DIP (DOE-UCLA)Q96N21
IntAct (EBI)Q96N21
BioGRIDTEPSIN
STRING (EMBL)TEPSIN
ZODIACTEPSIN
Ontologies - Pathways
QuickGOQ96N21
Ontology : AmiGOprotein binding  cytoplasm  Golgi apparatus  cytosol  nuclear speck  coated vesicle membrane  extrinsic component of organelle membrane  extrinsic component of organelle membrane  nuclear membrane  trans-Golgi network membrane  
Ontology : EGO-EBIprotein binding  cytoplasm  Golgi apparatus  cytosol  nuclear speck  coated vesicle membrane  extrinsic component of organelle membrane  extrinsic component of organelle membrane  nuclear membrane  trans-Golgi network membrane  
NDEx NetworkTEPSIN
Atlas of Cancer Signalling NetworkTEPSIN
Wikipedia pathwaysTEPSIN
Orthology - Evolution
OrthoDB146705
GeneTree (enSembl)ENSG00000167302
Phylogenetic Trees/Animal Genes : TreeFamTEPSIN
Homologs : HomoloGeneTEPSIN
Homology/Alignments : Family Browser (UCSC)TEPSIN
Gene fusions - Rearrangements
Fusion : QuiverTEPSIN
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTEPSIN [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TEPSIN
dbVarTEPSIN
ClinVarTEPSIN
MonarchTEPSIN
1000_GenomesTEPSIN 
Exome Variant ServerTEPSIN
GNOMAD BrowserENSG00000167302
Varsome BrowserTEPSIN
ACMGTEPSIN variants
VarityQ96N21
Genomic Variants (DGV)TEPSIN [DGVbeta]
DECIPHERTEPSIN [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTEPSIN 
Mutations
ICGC Data PortalTEPSIN 
TCGA Data PortalTEPSIN 
Broad Tumor PortalTEPSIN
OASIS PortalTEPSIN [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTEPSIN  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTEPSIN
Mutations and Diseases : HGMDTEPSIN
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTEPSIN
DgiDB (Drug Gene Interaction Database)TEPSIN
DoCM (Curated mutations)TEPSIN
CIViC (Clinical Interpretations of Variants in Cancer)TEPSIN
Cancer3DTEPSIN
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTEPSIN
MedgenTEPSIN
Genetic Testing Registry TEPSIN
NextProtQ96N21 [Medical]
GENETestsTEPSIN
Target ValidationTEPSIN
Huge Navigator TEPSIN [HugePedia]
ClinGenTEPSIN
Clinical trials, drugs, therapy
MyCancerGenomeTEPSIN
Protein Interactions : CTDTEPSIN
Pharm GKB GenePA142672239
PharosQ96N21
Clinical trialTEPSIN
Miscellaneous
canSAR (ICR)TEPSIN
HarmonizomeTEPSIN
DataMed IndexTEPSIN
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTEPSIN
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:25:13 CEST 2021

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