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TERB2 (telomere repeat binding bouquet formation protein 2)

Identity

Alias_namesC15orf43
chromosome 15 open reading frame 43
Alias_symbol (synonym)MGC33951
Other alias
HGNC (Hugo) TERB2
LocusID (NCBI) 145645
Atlas_Id 78361
Location 15q21.1  [Link to chromosome band 15q21]
Location_base_pair Starts at 44956702 and ends at 44979223 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TERB2   28520
Cards
Entrez_Gene (NCBI)TERB2  145645  telomere repeat binding bouquet formation protein 2
AliasesC15orf43
GeneCards (Weizmann)TERB2
Ensembl hg19 (Hinxton)ENSG00000167014 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000167014 [Gene_View]  chr15:44956702-44979223 [Contig_View]  TERB2 [Vega]
ICGC DataPortalENSG00000167014
TCGA cBioPortalTERB2
AceView (NCBI)TERB2
Genatlas (Paris)TERB2
WikiGenes145645
SOURCE (Princeton)TERB2
Genetics Home Reference (NIH)TERB2
Genomic and cartography
GoldenPath hg38 (UCSC)TERB2  -     chr15:44956702-44979223 +  15q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TERB2  -     15q21.1   [Description]    (hg19-Feb_2009)
EnsemblTERB2 - 15q21.1 [CytoView hg19]  TERB2 - 15q21.1 [CytoView hg38]
Mapping of homologs : NCBITERB2 [Mapview hg19]  TERB2 [Mapview hg38]
OMIM617131   
Gene and transcription
Genbank (Entrez)BC029537 DQ890983 DQ894158
RefSeq transcript (Entrez)NM_152448
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TERB2
Cluster EST : UnigeneHs.567701 [ NCBI ]
CGAP (NCI)Hs.567701
Alternative Splicing GalleryENSG00000167014
Gene ExpressionTERB2 [ NCBI-GEO ]   TERB2 [ EBI - ARRAY_EXPRESS ]   TERB2 [ SEEK ]   TERB2 [ MEM ]
Gene Expression Viewer (FireBrowse)TERB2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)145645
GTEX Portal (Tissue expression)TERB2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NHR7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NHR7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NHR7
Splice isoforms : SwissVarQ8NHR7
PhosPhoSitePlusQ8NHR7
Domains : Interpro (EBI)TERB2   
Domain families : Pfam (Sanger)TERB2 (PF15101)   
Domain families : Pfam (NCBI)pfam15101   
Conserved Domain (NCBI)TERB2
DMDM Disease mutations145645
Blocks (Seattle)TERB2
SuperfamilyQ8NHR7
Human Protein AtlasENSG00000167014
Peptide AtlasQ8NHR7
HPRD17528
IPIIPI00169304   
Protein Interaction databases
DIP (DOE-UCLA)Q8NHR7
IntAct (EBI)Q8NHR7
FunCoupENSG00000167014
BioGRIDTERB2
STRING (EMBL)TERB2
ZODIACTERB2
Ontologies - Pathways
QuickGOQ8NHR7
Ontology : AmiGOnuclear chromosome, telomeric region  nuclear inner membrane  synapsis  meiotic telomere clustering  meiotic attachment of telomere to nuclear envelope  
Ontology : EGO-EBInuclear chromosome, telomeric region  nuclear inner membrane  synapsis  meiotic telomere clustering  meiotic attachment of telomere to nuclear envelope  
NDEx NetworkTERB2
Atlas of Cancer Signalling NetworkTERB2
Wikipedia pathwaysTERB2
Orthology - Evolution
OrthoDB145645
GeneTree (enSembl)ENSG00000167014
Phylogenetic Trees/Animal Genes : TreeFamTERB2
HOVERGENQ8NHR7
HOGENOMQ8NHR7
Homologs : HomoloGeneTERB2
Homology/Alignments : Family Browser (UCSC)TERB2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTERB2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TERB2
dbVarTERB2
ClinVarTERB2
1000_GenomesTERB2 
Exome Variant ServerTERB2
ExAC (Exome Aggregation Consortium)TERB2 (select the gene name)
Genetic variants : HAPMAP145645
Genomic Variants (DGV)TERB2 [DGVbeta]
DECIPHERTERB2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTERB2 
Mutations
ICGC Data PortalTERB2 
TCGA Data PortalTERB2 
Broad Tumor PortalTERB2
OASIS PortalTERB2 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDTERB2
BioMutasearch TERB2
DgiDB (Drug Gene Interaction Database)TERB2
DoCM (Curated mutations)TERB2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TERB2 (select a term)
intoGenTERB2
Cancer3DTERB2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM617131   
Orphanet
MedgenTERB2
Genetic Testing Registry TERB2
NextProtQ8NHR7 [Medical]
TSGene145645
GENETestsTERB2
Target ValidationTERB2
Huge Navigator TERB2 [HugePedia]
snp3D : Map Gene to Disease145645
BioCentury BCIQTERB2
ClinGenTERB2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD145645
Chemical/Pharm GKB GenePA143485393
Clinical trialTERB2
Miscellaneous
canSAR (ICR)TERB2 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTERB2
EVEXTERB2
GoPubMedTERB2
iHOPTERB2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:41:15 CEST 2017

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