TET1 (tet oncogene 1)

Identity

Other names	CXXC6
	FLJ10839
	FLJ41442
	KIAA1676
	LCX
	bA119F7.1
HGNC	TET1
Location	10q21
Location_base_pair	Starts at 69990123 and ends at 70124245 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

External links

	Nomenclature
HGNC	TET1   29484
Entrez_Gene	TET1  80312  tet oncogene 1
	Cards
GeneCards	TET1
Ensembl	ENSG00000138336 [Gene_View]  TET1 [Vega]
Genatlas	TET1
	Genomic and cartography
GoldenPath	TET1  -  10q21   chr10:69990123-70124245 +  10q21.3   [Description]    (hg18-March_2006)
Ensembl	TET1 - 10q21.3 [CytoView]
NCBI	Mapview
OMIM	607790 Disease map [OMIM]
HomoloGene	TET1
	Gene and transcription
Genbank	AB051463 [ ENTREZ ]
Genbank	AF430147 [ ENTREZ ]
Genbank	AK123436 [ ENTREZ ]
Genbank	AL713658 [ ENTREZ ]
Genbank	AL832334 [ ENTREZ ]
RefSeq	NM_030625 [ SRS ]    NM_030625 [ ENTREZ ]
RefSeq	AC_000053 [ SRS ]    AC_000053 [ ENTREZ ]
RefSeq	AC_000142 [ SRS ]    AC_000142 [ ENTREZ ]
RefSeq	NC_000010 [ SRS ]    NC_000010 [ ENTREZ ]
RefSeq	NT_008583 [ SRS ]    NT_008583 [ ENTREZ ]
RefSeq	NW_001837986 [ SRS ]    NW_001837986 [ ENTREZ ]
RefSeq	NW_924796 [ SRS ]    NW_924796 [ ENTREZ ]
CCDS	TET1 CCDS - NCBI
AceView	TET1 AceView - NCBI
Unigene	Hs.708977 [ SRS ]    Hs.708977 [ NCBI ]
Fast-db	11595 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q8NFU7 [ SRS]    Q8NFU7 [ EXPASY ]     Q8NFU7 [ INTERPRO ]     Q8NFU7 [ UNIPROT ] Q8NFU7 [ VarSplice FASTA ]
Prosite	PS51058 ZF_CXXC [ SRS ]    PS51058 ZF_CXXC [ Expasy ]
Interpro	IPR002857 Znf_CXXC [ SRS ]    IPR002857 Znf_CXXC [ EBI ]
CluSTr	Q8NFU7
Pfam	PF02008 zf-CXXC [ SRS ]    PF02008 zf-CXXC [ Sanger ]    pfam02008 [ NCBI-CDD ]
Blocks	Q8NFU7
HPRD	09694
	Protein Interaction databases
DIP	Q8NFU7
IntAct	Q8NFU7
	Polymorphism : SNP, mutations, diseases
OMIM	607790    [ map ]
GENETests	607790
SNP	TET1 [dbSNP-NCBI]
SNP	NM_030625 [SNP-NCI]
SNP	TET1 [GeneSNPs - Utah]  TET1] [HGBASE - SRS]
HAPMAP	TET1 [HAPMAP]
COSMIC	TET1 [Somatic mutation (COSMIC-CGP-Sanger)]
TICdb	DNA [Translocation breakpoints In Cancer]
HGMD	TET1
Genetic Association	TET1
CDC HuGE	TET1
	General knowledge
Family Browser	TET1 [UCSC Family Browser]
SOURCE	NM_030625
SMD	Hs.708977
SAGE	Hs.708977
GO	DNA binding [Amigo]  DNA binding
GO	nucleus [Amigo]  nucleus
GO	zinc ion binding [Amigo]  zinc ion binding
GO	metal ion binding [Amigo]  metal ion binding
PubGene	TET1
TreeFam	TET1
CTD	80312 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	TET1 Related clones (RZPD - Berlin)
	PubMed
PubMed	7 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Thu Nov 27 14:15:14 2008