Atlas of Genetics and Cytogenetics in Oncology and Haematology

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TET2-AS1 (TET2 antisense RNA 1)


Alias (NCBI)-
HGNC (Hugo) TET2-AS1
HGNC Previous nameTET2 antisense RNA 1 (non-protein coding)
LocusID (NCBI) 104384744
Atlas_Id 76705
Location 4q24  [Link to chromosome band 4q24]
Location_base_pair Starts at 105171354 and ends at 105352881 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)TET2-AS1   41125
Entrez_Gene (NCBI)TET2-AS1    TET2 antisense RNA 1
GeneCards (Weizmann)TET2-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr4:105171354-105352881 [Contig_View]  TET2-AS1 [Vega]
TCGA cBioPortalTET2-AS1
AceView (NCBI)TET2-AS1
Genatlas (Paris)TET2-AS1
SOURCE (Princeton)TET2-AS1
Genetics Home Reference (NIH)TET2-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)TET2-AS1  -     chr4:105171354-105352881 -  4q24   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TET2-AS1  -     4q24   [Description]    (hg19-Feb_2009)
GoldenPathTET2-AS1 - 4q24 [CytoView hg19]  TET2-AS1 - 4q24 [CytoView hg38]
Genome Data Viewer NCBITET2-AS1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AI401598 BX100522
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)TET2-AS1
Gene ExpressionTET2-AS1 [ NCBI-GEO ]   TET2-AS1 [ EBI - ARRAY_EXPRESS ]   TET2-AS1 [ SEEK ]   TET2-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)TET2-AS1 [ Firebrowse - Broad ]
GenevisibleExpression of TET2-AS1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)104384744
GTEX Portal (Tissue expression)TET2-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TET2-AS1
Protein Interaction databases
Ontologies - Pathways
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:25:14 CEST 2021

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