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TEX13A (testis expressed 13A)

Identity

Alias (NCBI)-
HGNC (Hugo) TEX13A
HGNC Previous nametestis expressed sequence 13A
LocusID (NCBI) 56157
Atlas_Id 46767
Location Xq22.3  [Link to chromosome band Xq22]
Location_base_pair Starts at 105218929 and ends at 105220694 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TEX13A   11735
Cards
Entrez_Gene (NCBI)TEX13A    testis expressed 13A
Aliases
GeneCards (Weizmann)TEX13A
Ensembl hg19 (Hinxton)ENSG00000268629 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000268629 [Gene_View]  ENSG00000268629 [Sequence]  chrX:105218929-105220694 [Contig_View]  TEX13A [Vega]
ICGC DataPortalENSG00000268629
TCGA cBioPortalTEX13A
AceView (NCBI)TEX13A
Genatlas (Paris)TEX13A
SOURCE (Princeton)TEX13A
Genetics Home Reference (NIH)TEX13A
Genomic and cartography
GoldenPath hg38 (UCSC)TEX13A  -     chrX:105218929-105220694 -  Xq22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TEX13A  -     Xq22.3   [Description]    (hg19-Feb_2009)
GoldenPathTEX13A - Xq22.3 [CytoView hg19]  TEX13A - Xq22.3 [CytoView hg38]
ImmunoBaseENSG00000268629
Genome Data Viewer NCBITEX13A [Mapview hg19]  
OMIM300312   
Gene and transcription
Genbank (Entrez)AF285597 BC042547 BC108734 HY018872
RefSeq transcript (Entrez)NM_001291277 NM_031274
Consensus coding sequences : CCDS (NCBI)TEX13A
Gene ExpressionTEX13A [ NCBI-GEO ]   TEX13A [ EBI - ARRAY_EXPRESS ]   TEX13A [ SEEK ]   TEX13A [ MEM ]
Gene Expression Viewer (FireBrowse)TEX13A [ Firebrowse - Broad ]
GenevisibleExpression of TEX13A in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)56157
GTEX Portal (Tissue expression)TEX13A
Human Protein AtlasENSG00000268629-TEX13A [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BXU3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BXU3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BXU3
PhosPhoSitePlusQ9BXU3
Domaine pattern : Prosite (Expaxy)ZF_RANBP2_1 (PS01358)    ZF_RANBP2_2 (PS50199)   
Domains : Interpro (EBI)TEX13    Znf_RanBP2    Znf_RanBP2_sf   
Domain families : Pfam (Sanger)TEX13 (PF15186)   
Domain families : Pfam (NCBI)pfam15186   
Conserved Domain (NCBI)TEX13A
SuperfamilyQ9BXU3
AlphaFold pdb e-kbQ9BXU3   
Human Protein Atlas [tissue]ENSG00000268629-TEX13A [tissue]
HPRD02257
Protein Interaction databases
DIP (DOE-UCLA)Q9BXU3
IntAct (EBI)Q9BXU3
BioGRIDTEX13A
STRING (EMBL)TEX13A
ZODIACTEX13A
Ontologies - Pathways
QuickGOQ9BXU3
Ontology : AmiGOprotein binding  metal ion binding  
Ontology : EGO-EBIprotein binding  metal ion binding  
NDEx NetworkTEX13A
Atlas of Cancer Signalling NetworkTEX13A
Wikipedia pathwaysTEX13A
Orthology - Evolution
OrthoDB56157
GeneTree (enSembl)ENSG00000268629
Phylogenetic Trees/Animal Genes : TreeFamTEX13A
Homologs : HomoloGeneTEX13A
Homology/Alignments : Family Browser (UCSC)TEX13A
Gene fusions - Rearrangements
Fusion : QuiverTEX13A
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTEX13A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TEX13A
dbVarTEX13A
ClinVarTEX13A
MonarchTEX13A
1000_GenomesTEX13A 
Exome Variant ServerTEX13A
GNOMAD BrowserENSG00000268629
Varsome BrowserTEX13A
ACMGTEX13A variants
VarityQ9BXU3
Genomic Variants (DGV)TEX13A [DGVbeta]
DECIPHERTEX13A [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTEX13A 
Mutations
ICGC Data PortalTEX13A 
TCGA Data PortalTEX13A 
Broad Tumor PortalTEX13A
OASIS PortalTEX13A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTEX13A  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTEX13A
Mutations and Diseases : HGMDTEX13A
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTEX13A
DgiDB (Drug Gene Interaction Database)TEX13A
DoCM (Curated mutations)TEX13A
CIViC (Clinical Interpretations of Variants in Cancer)TEX13A
Cancer3DTEX13A
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300312   
Orphanet
DisGeNETTEX13A
MedgenTEX13A
Genetic Testing Registry TEX13A
NextProtQ9BXU3 [Medical]
GENETestsTEX13A
Target ValidationTEX13A
Huge Navigator TEX13A [HugePedia]
ClinGenTEX13A
Clinical trials, drugs, therapy
MyCancerGenomeTEX13A
Protein Interactions : CTDTEX13A
Pharm GKB GenePA36452
PharosQ9BXU3
Clinical trialTEX13A
Miscellaneous
canSAR (ICR)TEX13A
HarmonizomeTEX13A
DataMed IndexTEX13A
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTEX13A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:34:50 CEST 2021

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