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TEX14 (testis expressed 14)

Identity

Alias_namestestis expressed sequence 14
testis expressed 14
Alias_symbol (synonym)CT113
Other alias
HGNC (Hugo) TEX14
LocusID (NCBI) 56155
Atlas_Id 43528
Location 17q22  [Link to chromosome band 17q22]
Location_base_pair Starts at 56634038 and ends at 56769416 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
ARHGAP23 (17q12) / TEX14 (17q22)KIAA0100 (17q11.2) / TEX14 (17q22)TEX14 (17q22) / SDK2 (17q25.1)
ARHGAP23 17q12 / TEX14 17q22KIAA0100 17q11.2 / TEX14 17q22TEX14 17q22 / SDK2 17q25.1

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TEX14   11737
Cards
Entrez_Gene (NCBI)TEX14  56155  testis expressed 14
AliasesCT113
GeneCards (Weizmann)TEX14
Ensembl hg19 (Hinxton)ENSG00000121101 [Gene_View]  chr17:56634038-56769416 [Contig_View]  TEX14 [Vega]
Ensembl hg38 (Hinxton)ENSG00000121101 [Gene_View]  chr17:56634038-56769416 [Contig_View]  TEX14 [Vega]
ICGC DataPortalENSG00000121101
TCGA cBioPortalTEX14
AceView (NCBI)TEX14
Genatlas (Paris)TEX14
WikiGenes56155
SOURCE (Princeton)TEX14
Genetics Home Reference (NIH)TEX14
Genomic and cartography
GoldenPath hg19 (UCSC)TEX14  -     chr17:56634038-56769416 -  17q22   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)TEX14  -     17q22   [Description]    (hg38-Dec_2013)
EnsemblTEX14 - 17q22 [CytoView hg19]  TEX14 - 17q22 [CytoView hg38]
Mapping of homologs : NCBITEX14 [Mapview hg19]  TEX14 [Mapview hg38]
OMIM605792   
Gene and transcription
Genbank (Entrez)AF285601 AI243203 AK125896 AK128217 AK308299
RefSeq transcript (Entrez)NM_001201457 NM_031272 NM_198393
RefSeq genomic (Entrez)NC_000017 NC_018928 NT_010783 NW_004929407
Consensus coding sequences : CCDS (NCBI)TEX14
Cluster EST : UnigeneHs.390221 [ NCBI ]
CGAP (NCI)Hs.390221
Alternative Splicing GalleryENSG00000121101
Gene ExpressionTEX14 [ NCBI-GEO ]   TEX14 [ EBI - ARRAY_EXPRESS ]   TEX14 [ SEEK ]   TEX14 [ MEM ]
Gene Expression Viewer (FireBrowse)TEX14 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)56155
GTEX Portal (Tissue expression)TEX14
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IWB6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IWB6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IWB6
Splice isoforms : SwissVarQ8IWB6
PhosPhoSitePlusQ8IWB6
Domaine pattern : Prosite (Expaxy)ANK_REP_REGION (PS50297)    ANK_REPEAT (PS50088)    PROTEIN_KINASE_DOM (PS50011)   
Domains : Interpro (EBI)Ankyrin_rpt    Ankyrin_rpt-contain_dom    Kinase-like_dom    Prot_kinase_dom    Ser-Thr/Tyr_kinase_cat_dom   
Domain families : Pfam (Sanger)Ank_2 (PF12796)    Pkinase_Tyr (PF07714)   
Domain families : Pfam (NCBI)pfam12796    pfam07714   
Domain families : Smart (EMBL)ANK (SM00248)  
Conserved Domain (NCBI)TEX14
DMDM Disease mutations56155
Blocks (Seattle)TEX14
PDB (SRS)3WUT    3WUU   
PDB (PDBSum)3WUT    3WUU   
PDB (IMB)3WUT    3WUU   
PDB (RSDB)3WUT    3WUU   
Structural Biology KnowledgeBase3WUT    3WUU   
SCOP (Structural Classification of Proteins)3WUT    3WUU   
CATH (Classification of proteins structures)3WUT    3WUU   
SuperfamilyQ8IWB6
Human Protein AtlasENSG00000121101
Peptide AtlasQ8IWB6
IPIIPI00217259   IPI00783967   IPI00784285   
Protein Interaction databases
DIP (DOE-UCLA)Q8IWB6
IntAct (EBI)Q8IWB6
FunCoupENSG00000121101
BioGRIDTEX14
STRING (EMBL)TEX14
ZODIACTEX14
Ontologies - Pathways
QuickGOQ8IWB6
Ontology : AmiGOkinetochore  condensed chromosome kinetochore  protein kinase activity  protein binding  ATP binding  cell  cytoplasm  protein phosphorylation  mitotic spindle assembly checkpoint  male meiosis  attachment of spindle microtubules to kinetochore  protein kinase binding  midbody  negative regulation of protein binding  negative regulation of cytokinesis  intercellular bridge organization  intercellular bridge  cell division  mitotic sister chromatid separation  extracellular exosome  
Ontology : EGO-EBIkinetochore  condensed chromosome kinetochore  protein kinase activity  protein binding  ATP binding  cell  cytoplasm  protein phosphorylation  mitotic spindle assembly checkpoint  male meiosis  attachment of spindle microtubules to kinetochore  protein kinase binding  midbody  negative regulation of protein binding  negative regulation of cytokinesis  intercellular bridge organization  intercellular bridge  cell division  mitotic sister chromatid separation  extracellular exosome  
NDEx NetworkTEX14
Atlas of Cancer Signalling NetworkTEX14
Wikipedia pathwaysTEX14
Orthology - Evolution
OrthoDB56155
GeneTree (enSembl)ENSG00000121101
Phylogenetic Trees/Animal Genes : TreeFamTEX14
HOVERGENQ8IWB6
HOGENOMQ8IWB6
Homologs : HomoloGeneTEX14
Homology/Alignments : Family Browser (UCSC)TEX14
Gene fusions - Rearrangements
Fusion : MitelmanKIAA0100/TEX14 [17q11.2/17q22]  [t(17;17)(q11;q22)]  
Fusion : MitelmanTEX14/SDK2 [17q22/17q25.1]  [t(17;17)(q22;q25)]  
Fusion: TCGAARHGAP23 17q12 TEX14 17q22 BRCA
Fusion: TCGAKIAA0100 17q11.2 TEX14 17q22 BRCA
Fusion: TCGATEX14 17q22 SDK2 17q25.1 BRCA
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTEX14 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TEX14
dbVarTEX14
ClinVarTEX14
1000_GenomesTEX14 
Exome Variant ServerTEX14
ExAC (Exome Aggregation Consortium)TEX14 (select the gene name)
Genetic variants : HAPMAP56155
Genomic Variants (DGV)TEX14 [DGVbeta]
DECIPHER (Syndromes)17:56634038-56769416  ENSG00000121101
CONAN: Copy Number AnalysisTEX14 
Mutations
ICGC Data PortalTEX14 
TCGA Data PortalTEX14 
Broad Tumor PortalTEX14
OASIS PortalTEX14 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTEX14  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTEX14
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TEX14
DgiDB (Drug Gene Interaction Database)TEX14
DoCM (Curated mutations)TEX14 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TEX14 (select a term)
intoGenTEX14
Cancer3DTEX14(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605792   
Orphanet
MedgenTEX14
Genetic Testing Registry TEX14
NextProtQ8IWB6 [Medical]
TSGene56155
GENETestsTEX14
Huge Navigator TEX14 [HugePedia]
snp3D : Map Gene to Disease56155
BioCentury BCIQTEX14
ClinGenTEX14
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD56155
Chemical/Pharm GKB GenePA36454
Clinical trialTEX14
Miscellaneous
canSAR (ICR)TEX14 (select the gene name)
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTEX14
EVEXTEX14
GoPubMedTEX14
iHOPTEX14
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 13:30:51 CET 2017

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