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TEX22 (testis expressed 22)

Identity

Alias (NCBI)-
HGNC (Hugo) TEX22
LocusID (NCBI) 647310
Atlas_Id 74632
Location 14q32.33  [Link to chromosome band 14q32]
Location_base_pair Starts at 105398538 and ends at 105413859 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
TEX22 (14q32.33) / PLEKHG2 (19q13.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TEX22   40026
Cards
Entrez_Gene (NCBI)TEX22    testis expressed 22
Aliases
GeneCards (Weizmann)TEX22
Ensembl hg19 (Hinxton)ENSG00000226174 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000226174 [Gene_View]  ENSG00000226174 [Sequence]  chr14:105398538-105413859 [Contig_View]  TEX22 [Vega]
ICGC DataPortalENSG00000226174
TCGA cBioPortalTEX22
AceView (NCBI)TEX22
Genatlas (Paris)TEX22
SOURCE (Princeton)TEX22
Genetics Home Reference (NIH)TEX22
Genomic and cartography
GoldenPath hg38 (UCSC)TEX22  -     chr14:105398538-105413859 +  14q32.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TEX22  -     14q32.33   [Description]    (hg19-Feb_2009)
GoldenPathTEX22 - 14q32.33 [CytoView hg19]  TEX22 - 14q32.33 [CytoView hg38]
ImmunoBaseENSG00000226174
Genome Data Viewer NCBITEX22 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BC009212 BC012979 BC015572 BX378619
RefSeq transcript (Entrez)NM_001195082
Consensus coding sequences : CCDS (NCBI)TEX22
Gene ExpressionTEX22 [ NCBI-GEO ]   TEX22 [ EBI - ARRAY_EXPRESS ]   TEX22 [ SEEK ]   TEX22 [ MEM ]
Gene Expression Viewer (FireBrowse)TEX22 [ Firebrowse - Broad ]
GenevisibleExpression of TEX22 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)647310
GTEX Portal (Tissue expression)TEX22
Human Protein AtlasENSG00000226174-TEX22 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtC9J3V5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtC9J3V5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProC9J3V5
PhosPhoSitePlusC9J3V5
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TEX22
SuperfamilyC9J3V5
AlphaFold pdb e-kbC9J3V5   
Human Protein Atlas [tissue]ENSG00000226174-TEX22 [tissue]
Protein Interaction databases
DIP (DOE-UCLA)C9J3V5
IntAct (EBI)C9J3V5
BioGRIDTEX22
STRING (EMBL)TEX22
ZODIACTEX22
Ontologies - Pathways
QuickGOC9J3V5
Ontology : AmiGOacrosomal vesicle  
Ontology : EGO-EBIacrosomal vesicle  
NDEx NetworkTEX22
Atlas of Cancer Signalling NetworkTEX22
Wikipedia pathwaysTEX22
Orthology - Evolution
OrthoDB647310
GeneTree (enSembl)ENSG00000226174
Phylogenetic Trees/Animal Genes : TreeFamTEX22
Homologs : HomoloGeneTEX22
Homology/Alignments : Family Browser (UCSC)TEX22
Gene fusions - Rearrangements
Fusion : QuiverTEX22
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTEX22 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TEX22
dbVarTEX22
ClinVarTEX22
MonarchTEX22
1000_GenomesTEX22 
Exome Variant ServerTEX22
GNOMAD BrowserENSG00000226174
Varsome BrowserTEX22
ACMGTEX22 variants
VarityC9J3V5
Genomic Variants (DGV)TEX22 [DGVbeta]
DECIPHERTEX22 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTEX22 
Mutations
ICGC Data PortalTEX22 
TCGA Data PortalTEX22 
Broad Tumor PortalTEX22
OASIS PortalTEX22 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTEX22  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTEX22
Mutations and Diseases : HGMDTEX22
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTEX22
DgiDB (Drug Gene Interaction Database)TEX22
DoCM (Curated mutations)TEX22
CIViC (Clinical Interpretations of Variants in Cancer)TEX22
Cancer3DTEX22
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTEX22
MedgenTEX22
Genetic Testing Registry TEX22
NextProtC9J3V5 [Medical]
GENETestsTEX22
Target ValidationTEX22
Huge Navigator TEX22 [HugePedia]
ClinGenTEX22
Clinical trials, drugs, therapy
MyCancerGenomeTEX22
Protein Interactions : CTDTEX22
Pharm GKB GenePA166049048
PharosC9J3V5
Clinical trialTEX22
Miscellaneous
canSAR (ICR)TEX22
HarmonizomeTEX22
DataMed IndexTEX22
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTEX22
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:25:16 CEST 2021

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