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TEX26 (testis expressed 26)

Identity

Alias_namesC13orf26
chromosome 13 open reading frame 26
Alias_symbol (synonym)MGC40178
Other alias
HGNC (Hugo) TEX26
LocusID (NCBI) 122046
Atlas_Id 74633
Location 13q12.3  [Link to chromosome band 13q12]
Location_base_pair Starts at 30932697 and ends at 30975016 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
B3GLCT (13q12.3) / TEX26 (13q12.3)TEX26 (13q12.3) / SNRPN (15q11.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TEX26   28622
Cards
Entrez_Gene (NCBI)TEX26  122046  testis expressed 26
AliasesC13orf26
GeneCards (Weizmann)TEX26
Ensembl hg19 (Hinxton)ENSG00000175664 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000175664 [Gene_View]  chr13:30932697-30975016 [Contig_View]  TEX26 [Vega]
ICGC DataPortalENSG00000175664
TCGA cBioPortalTEX26
AceView (NCBI)TEX26
Genatlas (Paris)TEX26
WikiGenes122046
SOURCE (Princeton)TEX26
Genetics Home Reference (NIH)TEX26
Genomic and cartography
GoldenPath hg38 (UCSC)TEX26  -     chr13:30932697-30975016 +  13q12.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TEX26  -     13q12.3   [Description]    (hg19-Feb_2009)
EnsemblTEX26 - 13q12.3 [CytoView hg19]  TEX26 - 13q12.3 [CytoView hg38]
Mapping of homologs : NCBITEX26 [Mapview hg19]  TEX26 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC030277 HQ447104
RefSeq transcript (Entrez)NM_152325
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TEX26
Cluster EST : UnigeneHs.124463 [ NCBI ]
CGAP (NCI)Hs.124463
Alternative Splicing GalleryENSG00000175664
Gene ExpressionTEX26 [ NCBI-GEO ]   TEX26 [ EBI - ARRAY_EXPRESS ]   TEX26 [ SEEK ]   TEX26 [ MEM ]
Gene Expression Viewer (FireBrowse)TEX26 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)122046
GTEX Portal (Tissue expression)TEX26
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N6G2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N6G2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N6G2
Splice isoforms : SwissVarQ8N6G2
PhosPhoSitePlusQ8N6G2
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TEX26
DMDM Disease mutations122046
Blocks (Seattle)TEX26
SuperfamilyQ8N6G2
Human Protein AtlasENSG00000175664
Peptide AtlasQ8N6G2
HPRD17551
IPIIPI00167006   IPI00976756   
Protein Interaction databases
DIP (DOE-UCLA)Q8N6G2
IntAct (EBI)Q8N6G2
FunCoupENSG00000175664
BioGRIDTEX26
STRING (EMBL)TEX26
ZODIACTEX26
Ontologies - Pathways
QuickGOQ8N6G2
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkTEX26
Atlas of Cancer Signalling NetworkTEX26
Wikipedia pathwaysTEX26
Orthology - Evolution
OrthoDB122046
GeneTree (enSembl)ENSG00000175664
Phylogenetic Trees/Animal Genes : TreeFamTEX26
HOVERGENQ8N6G2
HOGENOMQ8N6G2
Homologs : HomoloGeneTEX26
Homology/Alignments : Family Browser (UCSC)TEX26
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTEX26 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TEX26
dbVarTEX26
ClinVarTEX26
1000_GenomesTEX26 
Exome Variant ServerTEX26
ExAC (Exome Aggregation Consortium)TEX26 (select the gene name)
Genetic variants : HAPMAP122046
Genomic Variants (DGV)TEX26 [DGVbeta]
DECIPHERTEX26 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTEX26 
Mutations
ICGC Data PortalTEX26 
TCGA Data PortalTEX26 
Broad Tumor PortalTEX26
OASIS PortalTEX26 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDTEX26
BioMutasearch TEX26
DgiDB (Drug Gene Interaction Database)TEX26
DoCM (Curated mutations)TEX26 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TEX26 (select a term)
intoGenTEX26
Cancer3DTEX26(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTEX26
Genetic Testing Registry TEX26
NextProtQ8N6G2 [Medical]
TSGene122046
GENETestsTEX26
Target ValidationTEX26
Huge Navigator TEX26 [HugePedia]
snp3D : Map Gene to Disease122046
BioCentury BCIQTEX26
ClinGenTEX26
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD122046
Chemical/Pharm GKB GenePA144596482
Clinical trialTEX26
Miscellaneous
canSAR (ICR)TEX26 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTEX26
EVEXTEX26
GoPubMedTEX26
iHOPTEX26
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:41:16 CEST 2017

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