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TEX261 (testis expressed 261)

Identity

Alias_namestestis expressed sequence 261
Alias_symbol (synonym)MGC32043
TEG-261
Other alias
HGNC (Hugo) TEX261
LocusID (NCBI) 113419
Atlas_Id 74634
Location 2p13.3  [Link to chromosome band 2p13]
Location_base_pair Starts at 70985938 and ends at 70994871 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
TEX261 (2p13.3) / TEX261 (2p13.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TEX261   30712
Cards
Entrez_Gene (NCBI)TEX261  113419  testis expressed 261
AliasesTEG-261
GeneCards (Weizmann)TEX261
Ensembl hg19 (Hinxton)ENSG00000144043 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000144043 [Gene_View]  chr2:70985938-70994871 [Contig_View]  TEX261 [Vega]
ICGC DataPortalENSG00000144043
TCGA cBioPortalTEX261
AceView (NCBI)TEX261
Genatlas (Paris)TEX261
WikiGenes113419
SOURCE (Princeton)TEX261
Genetics Home Reference (NIH)TEX261
Genomic and cartography
GoldenPath hg38 (UCSC)TEX261  -     chr2:70985938-70994871 -  2p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TEX261  -     2p13.3   [Description]    (hg19-Feb_2009)
EnsemblTEX261 - 2p13.3 [CytoView hg19]  TEX261 - 2p13.3 [CytoView hg38]
Mapping of homologs : NCBITEX261 [Mapview hg19]  TEX261 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK056410 AK074840 AK303594 AK315543 AL080223
RefSeq transcript (Entrez)NM_144582
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TEX261
Cluster EST : UnigeneHs.516087 [ NCBI ]
CGAP (NCI)Hs.516087
Alternative Splicing GalleryENSG00000144043
Gene ExpressionTEX261 [ NCBI-GEO ]   TEX261 [ EBI - ARRAY_EXPRESS ]   TEX261 [ SEEK ]   TEX261 [ MEM ]
Gene Expression Viewer (FireBrowse)TEX261 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)113419
GTEX Portal (Tissue expression)TEX261
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6UWH6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6UWH6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6UWH6
Splice isoforms : SwissVarQ6UWH6
PhosPhoSitePlusQ6UWH6
Domains : Interpro (EBI)Transmembrane_adaptor_Erv26   
Domain families : Pfam (Sanger)Erv26 (PF04148)   
Domain families : Pfam (NCBI)pfam04148   
Conserved Domain (NCBI)TEX261
DMDM Disease mutations113419
Blocks (Seattle)TEX261
SuperfamilyQ6UWH6
Human Protein AtlasENSG00000144043
Peptide AtlasQ6UWH6
HPRD15491
IPIIPI00163486   IPI00217907   IPI00926950   
Protein Interaction databases
DIP (DOE-UCLA)Q6UWH6
IntAct (EBI)Q6UWH6
FunCoupENSG00000144043
BioGRIDTEX261
STRING (EMBL)TEX261
ZODIACTEX261
Ontologies - Pathways
QuickGOQ6UWH6
Ontology : AmiGOER to Golgi vesicle-mediated transport  ER to Golgi transport vesicle  integral component of Golgi membrane  integral component of endoplasmic reticulum membrane  COPII adaptor activity  
Ontology : EGO-EBIER to Golgi vesicle-mediated transport  ER to Golgi transport vesicle  integral component of Golgi membrane  integral component of endoplasmic reticulum membrane  COPII adaptor activity  
NDEx NetworkTEX261
Atlas of Cancer Signalling NetworkTEX261
Wikipedia pathwaysTEX261
Orthology - Evolution
OrthoDB113419
GeneTree (enSembl)ENSG00000144043
Phylogenetic Trees/Animal Genes : TreeFamTEX261
HOVERGENQ6UWH6
HOGENOMQ6UWH6
Homologs : HomoloGeneTEX261
Homology/Alignments : Family Browser (UCSC)TEX261
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTEX261 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TEX261
dbVarTEX261
ClinVarTEX261
1000_GenomesTEX261 
Exome Variant ServerTEX261
ExAC (Exome Aggregation Consortium)TEX261 (select the gene name)
Genetic variants : HAPMAP113419
Genomic Variants (DGV)TEX261 [DGVbeta]
DECIPHERTEX261 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTEX261 
Mutations
ICGC Data PortalTEX261 
TCGA Data PortalTEX261 
Broad Tumor PortalTEX261
OASIS PortalTEX261 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTEX261  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTEX261
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TEX261
DgiDB (Drug Gene Interaction Database)TEX261
DoCM (Curated mutations)TEX261 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TEX261 (select a term)
intoGenTEX261
Cancer3DTEX261(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTEX261
Genetic Testing Registry TEX261
NextProtQ6UWH6 [Medical]
TSGene113419
GENETestsTEX261
Target ValidationTEX261
Huge Navigator TEX261 [HugePedia]
snp3D : Map Gene to Disease113419
BioCentury BCIQTEX261
ClinGenTEX261
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD113419
Chemical/Pharm GKB GenePA134885680
Clinical trialTEX261
Miscellaneous
canSAR (ICR)TEX261 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTEX261
EVEXTEX261
GoPubMedTEX261
iHOPTEX261
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:41:17 CEST 2017

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