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TEX33 (testis expressed 33)

Identity

Alias_namesC22orf33
chromosome 22 open reading frame 33
Alias_symbol (synonym)MGC35206
EAN57
Other aliascE81G9.2
HGNC (Hugo) TEX33
LocusID (NCBI) 339669
Atlas_Id 74640
Location 22q12.3  [Link to chromosome band 22q12]
Location_base_pair Starts at 37387160 and ends at 37403877 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TEX33   28568
Cards
Entrez_Gene (NCBI)TEX33  339669  testis expressed 33
AliasesC22orf33; EAN57; cE81G9.2
GeneCards (Weizmann)TEX33
Ensembl hg19 (Hinxton)ENSG00000185264 [Gene_View]  chr22:37387160-37403877 [Contig_View]  TEX33 [Vega]
Ensembl hg38 (Hinxton)ENSG00000185264 [Gene_View]  chr22:37387160-37403877 [Contig_View]  TEX33 [Vega]
ICGC DataPortalENSG00000185264
TCGA cBioPortalTEX33
AceView (NCBI)TEX33
Genatlas (Paris)TEX33
WikiGenes339669
SOURCE (Princeton)TEX33
Genetics Home Reference (NIH)TEX33
Genomic and cartography
GoldenPath hg19 (UCSC)TEX33  -     chr22:37387160-37403877 -  22q12.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)TEX33  -     22q12.3   [Description]    (hg38-Dec_2013)
EnsemblTEX33 - 22q12.3 [CytoView hg19]  TEX33 - 22q12.3 [CytoView hg38]
Mapping of homologs : NCBITEX33 [Mapview hg19]  TEX33 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC042635 BE502000 BI827796 CR456416 DB447439
RefSeq transcript (Entrez)NM_001163857 NM_178552
RefSeq genomic (Entrez)NC_000022 NC_018933 NT_011520 NW_004929430
Consensus coding sequences : CCDS (NCBI)TEX33
Cluster EST : UnigeneHs.124502 [ NCBI ]
CGAP (NCI)Hs.124502
Alternative Splicing GalleryENSG00000185264
Gene ExpressionTEX33 [ NCBI-GEO ]   TEX33 [ EBI - ARRAY_EXPRESS ]   TEX33 [ SEEK ]   TEX33 [ MEM ]
Gene Expression Viewer (FireBrowse)TEX33 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)339669
GTEX Portal (Tissue expression)TEX33
Protein : pattern, domain, 3D structure
UniProt/SwissProtO43247   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO43247  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO43247
Splice isoforms : SwissVarO43247
PhosPhoSitePlusO43247
Domains : Interpro (EBI)TEX33_prot   
Domain families : Pfam (Sanger)TEX33 (PF15400)   
Domain families : Pfam (NCBI)pfam15400   
Conserved Domain (NCBI)TEX33
DMDM Disease mutations339669
Blocks (Seattle)TEX33
SuperfamilyO43247
Human Protein AtlasENSG00000185264
Peptide AtlasO43247
HPRD17529
IPIIPI00011608   IPI00747846   IPI00879059   
Protein Interaction databases
DIP (DOE-UCLA)O43247
IntAct (EBI)O43247
FunCoupENSG00000185264
BioGRIDTEX33
STRING (EMBL)TEX33
ZODIACTEX33
Ontologies - Pathways
QuickGOO43247
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkTEX33
Atlas of Cancer Signalling NetworkTEX33
Wikipedia pathwaysTEX33
Orthology - Evolution
OrthoDB339669
GeneTree (enSembl)ENSG00000185264
Phylogenetic Trees/Animal Genes : TreeFamTEX33
HOVERGENO43247
HOGENOMO43247
Homologs : HomoloGeneTEX33
Homology/Alignments : Family Browser (UCSC)TEX33
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTEX33 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TEX33
dbVarTEX33
ClinVarTEX33
1000_GenomesTEX33 
Exome Variant ServerTEX33
ExAC (Exome Aggregation Consortium)TEX33 (select the gene name)
Genetic variants : HAPMAP339669
Genomic Variants (DGV)TEX33 [DGVbeta]
DECIPHER (Syndromes)22:37387160-37403877  ENSG00000185264
CONAN: Copy Number AnalysisTEX33 
Mutations
ICGC Data PortalTEX33 
TCGA Data PortalTEX33 
Broad Tumor PortalTEX33
OASIS PortalTEX33 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTEX33  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTEX33
BioMutasearch TEX33
DgiDB (Drug Gene Interaction Database)TEX33
DoCM (Curated mutations)TEX33 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TEX33 (select a term)
intoGenTEX33
Cancer3DTEX33(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTEX33
Genetic Testing Registry TEX33
NextProtO43247 [Medical]
TSGene339669
GENETestsTEX33
Huge Navigator TEX33 [HugePedia]
snp3D : Map Gene to Disease339669
BioCentury BCIQTEX33
ClinGenTEX33
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD339669
Chemical/Pharm GKB GenePA162378965
Clinical trialTEX33
Miscellaneous
canSAR (ICR)TEX33 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTEX33
EVEXTEX33
GoPubMedTEX33
iHOPTEX33
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:47:55 CET 2017

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