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TEX46 (testis expressed 46)

Identity

Alias_namesC1orf234
chromosome 1 open reading frame 234
Other aliasTEX#
HGNC (Hugo) TEX46
LocusID (NCBI) 729059
Atlas_Id 79224
Location 1p36.12  [Link to chromosome band 1p36]
Location_base_pair Starts at 23010834 and ends at 23015850 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TEX46   44651
Cards
Entrez_Gene (NCBI)TEX46  729059  testis expressed 46
AliasesC1orf234; TEX#
GeneCards (Weizmann)TEX46
Ensembl hg19 (Hinxton)ENSG00000227868 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000227868 [Gene_View]  chr1:23010834-23015850 [Contig_View]  TEX46 [Vega]
ICGC DataPortalENSG00000227868
TCGA cBioPortalTEX46
AceView (NCBI)TEX46
Genatlas (Paris)TEX46
WikiGenes729059
SOURCE (Princeton)TEX46
Genetics Home Reference (NIH)TEX46
Genomic and cartography
GoldenPath hg38 (UCSC)TEX46  -     chr1:23010834-23015850 -  1p36.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TEX46  -     1p36.12   [Description]    (hg19-Feb_2009)
EnsemblTEX46 - 1p36.12 [CytoView hg19]  TEX46 - 1p36.12 [CytoView hg38]
Mapping of homologs : NCBITEX46 [Mapview hg19]  TEX46 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI652913 BX351337 BX377446
RefSeq transcript (Entrez)NM_001242521
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TEX46
Cluster EST : UnigeneHs.236896 [ NCBI ]
CGAP (NCI)Hs.236896
Alternative Splicing GalleryENSG00000227868
Gene ExpressionTEX46 [ NCBI-GEO ]   TEX46 [ EBI - ARRAY_EXPRESS ]   TEX46 [ SEEK ]   TEX46 [ MEM ]
Gene Expression Viewer (FireBrowse)TEX46 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)729059
GTEX Portal (Tissue expression)TEX46
Human Protein AtlasENSG00000227868-TEX46 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TEX46
DMDM Disease mutations729059
Blocks (Seattle)TEX46
Human Protein Atlas [tissue]ENSG00000227868-TEX46 [tissue]
IPIIPI00746430   
Protein Interaction databases
FunCoupENSG00000227868
BioGRIDTEX46
STRING (EMBL)TEX46
ZODIACTEX46
Ontologies - Pathways
Huge Navigator TEX46 [HugePedia]
snp3D : Map Gene to Disease729059
BioCentury BCIQTEX46
ClinGenTEX46
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD729059
Chemical/Pharm GKB GenePA166123666
Clinical trialTEX46
Miscellaneous
canSAR (ICR)TEX46 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineTEX46
EVEXTEX46
GoPubMedTEX46
iHOPTEX46
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:03:21 CET 2017

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