Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

TEX46 (testis expressed 46)

Identity

Alias (NCBI)C1orf234
TEX#
HGNC (Hugo) TEX46
HGNC Previous nameC1orf234
HGNC Previous namechromosome 1 open reading frame 234
LocusID (NCBI) 729059
Atlas_Id 79224
Location 1p36.12  [Link to chromosome band 1p36]
Location_base_pair Starts at 23010834 and ends at 23015852 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)TEX46   44651
Cards
Entrez_Gene (NCBI)TEX46    testis expressed 46
AliasesC1orf234; TEX#
GeneCards (Weizmann)TEX46
Ensembl hg19 (Hinxton)ENSG00000227868 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000227868 [Gene_View]  ENSG00000227868 [Sequence]  chr1:23010834-23015852 [Contig_View]  TEX46 [Vega]
ICGC DataPortalENSG00000227868
TCGA cBioPortalTEX46
AceView (NCBI)TEX46
Genatlas (Paris)TEX46
SOURCE (Princeton)TEX46
Genetics Home Reference (NIH)TEX46
Genomic and cartography
GoldenPath hg38 (UCSC)TEX46  -     chr1:23010834-23015852 -  1p36.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TEX46  -     1p36.12   [Description]    (hg19-Feb_2009)
GoldenPathTEX46 - 1p36.12 [CytoView hg19]  TEX46 - 1p36.12 [CytoView hg38]
ImmunoBaseENSG00000227868
Genome Data Viewer NCBITEX46 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AI652913 BX351337 BX377446
RefSeq transcript (Entrez)NM_001242521
Consensus coding sequences : CCDS (NCBI)TEX46
Gene ExpressionTEX46 [ NCBI-GEO ]   TEX46 [ EBI - ARRAY_EXPRESS ]   TEX46 [ SEEK ]   TEX46 [ MEM ]
Gene Expression Viewer (FireBrowse)TEX46 [ Firebrowse - Broad ]
GenevisibleExpression of TEX46 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)729059
GTEX Portal (Tissue expression)TEX46
Human Protein AtlasENSG00000227868-TEX46 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TEX46
Human Protein Atlas [tissue]ENSG00000227868-TEX46 [tissue]
Protein Interaction databases
BioGRIDTEX46
STRING (EMBL)TEX46
ZODIACTEX46
Ontologies - Pathways
Litterature
GeneRIFsGene References Into Functions (Entrez)
EVEXTEX46
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:25:20 CEST 2021

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.