Atlas of Genetics and Cytogenetics in Oncology and Haematology

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

TEX49 (testis expressed 49)


Alias (NCBI)LINC00935
HGNC (Hugo) TEX49
HGNC Previous nameLINC00935
HGNC Previous namelong intergenic non-protein coding RNA 935
LocusID (NCBI) 255411
Atlas_Id 78936
Location 12q13.12  [Link to chromosome band 12q13]
Location_base_pair Starts at 48727435 and ends at 48765788 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)TEX49   48628
Entrez_Gene (NCBI)TEX49    testis expressed 49
GeneCards (Weizmann)TEX49
Ensembl hg19 (Hinxton)ENSG00000257987 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000257987 [Gene_View]  ENSG00000257987 [Sequence]  chr12:48727435-48765788 [Contig_View]  TEX49 [Vega]
ICGC DataPortalENSG00000257987
TCGA cBioPortalTEX49
AceView (NCBI)TEX49
Genatlas (Paris)TEX49
SOURCE (Princeton)TEX49
Genetics Home Reference (NIH)TEX49
Genomic and cartography
GoldenPath hg38 (UCSC)TEX49  -     chr12:48727435-48765788 +  12q13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TEX49  -     12q13.12   [Description]    (hg19-Feb_2009)
GoldenPathTEX49 - 12q13.12 [CytoView hg19]  TEX49 - 12q13.12 [CytoView hg38]
Genome Data Viewer NCBITEX49 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK131005 BC036043 BC054859 BC146870 BC146877
RefSeq transcript (Entrez)NM_001351123 NM_001351125
Consensus coding sequences : CCDS (NCBI)TEX49
Gene ExpressionTEX49 [ NCBI-GEO ]   TEX49 [ EBI - ARRAY_EXPRESS ]   TEX49 [ SEEK ]   TEX49 [ MEM ]
Gene Expression Viewer (FireBrowse)TEX49 [ Firebrowse - Broad ]
GenevisibleExpression of TEX49 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)255411
GTEX Portal (Tissue expression)TEX49
Human Protein AtlasENSG00000257987-TEX49 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TEX49
Human Protein Atlas [tissue]ENSG00000257987-TEX49 [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:25:21 CEST 2021

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us