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TEX50 (testis expressed 50)

Identity

Other alias-
HGNC (Hugo) TEX50
LocusID (NCBI) 730159
Atlas_Id 79788
Location 1q25.1  [Link to chromosome band 1q25]
Location_base_pair Starts at 173635304 and ends at 173637133 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TEX50   52382
Cards
Entrez_Gene (NCBI)TEX50  730159  testis expressed 50
Aliases
GeneCards (Weizmann)TEX50
Ensembl hg19 (Hinxton)ENSG00000232113 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000232113 [Gene_View]  chr1:173635304-173637133 [Contig_View]  TEX50 [Vega]
ICGC DataPortalENSG00000232113
TCGA cBioPortalTEX50
AceView (NCBI)TEX50
Genatlas (Paris)TEX50
WikiGenes730159
SOURCE (Princeton)TEX50
Genetics Home Reference (NIH)TEX50
Genomic and cartography
GoldenPath hg38 (UCSC)TEX50  -     chr1:173635304-173637133 +  1q25.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TEX50  -     1q25.1   [Description]    (hg19-Feb_2009)
EnsemblTEX50 - 1q25.1 [CytoView hg19]  TEX50 - 1q25.1 [CytoView hg38]
Mapping of homologs : NCBITEX50 [Mapview hg19]  TEX50 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI205673 DW009681 HY001733 HY185110
RefSeq transcript (Entrez)NM_001195190
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TEX50
Cluster EST : UnigeneHs.647757 [ NCBI ]
CGAP (NCI)Hs.647757
Alternative Splicing GalleryENSG00000232113
Gene ExpressionTEX50 [ NCBI-GEO ]   TEX50 [ EBI - ARRAY_EXPRESS ]   TEX50 [ SEEK ]   TEX50 [ MEM ]
Gene Expression Viewer (FireBrowse)TEX50 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)730159
GTEX Portal (Tissue expression)TEX50
Human Protein AtlasENSG00000232113-TEX50 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TEX50
DMDM Disease mutations730159
Blocks (Seattle)TEX50
Human Protein Atlas [tissue]ENSG00000232113-TEX50 [tissue]
IPIIPI00977199   
Protein Interaction databases
FunCoupENSG00000232113
BioGRIDTEX50
STRING (EMBL)TEX50
ZODIACTEX50
Ontologies - Pathways
Huge Navigator TEX50 [HugePedia]
snp3D : Map Gene to Disease730159
BioCentury BCIQTEX50
ClinGenTEX50
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD730159
Clinical trialTEX50
Miscellaneous
canSAR (ICR)TEX50 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineTEX50
EVEXTEX50
GoPubMedTEX50
iHOPTEX50
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:03:21 CET 2017

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