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TFAP2A-AS2 (TFAP2A antisense RNA 2)

Identity

Alias_symbol (synonym)HIPSTR
Other alias
HGNC (Hugo) TFAP2A-AS2
LocusID (NCBI) 109729173
Atlas_Id 78994
Location 6p24.3  [Link to chromosome band 6p24]
Location_base_pair Starts at 10404502 and ends at 10407927 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TFAP2A-AS2   52289
Cards
Entrez_Gene (NCBI)TFAP2A-AS2  109729173  TFAP2A antisense RNA 2
AliasesHIPSTR
GeneCards (Weizmann)TFAP2A-AS2
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:10404502-10407927 [Contig_View]  TFAP2A-AS2 [Vega]
TCGA cBioPortalTFAP2A-AS2
AceView (NCBI)TFAP2A-AS2
Genatlas (Paris)TFAP2A-AS2
WikiGenes109729173
SOURCE (Princeton)TFAP2A-AS2
Genetics Home Reference (NIH)TFAP2A-AS2
Genomic and cartography
GoldenPath hg38 (UCSC)TFAP2A-AS2  -     chr6:10404502-10407927 +  6p24.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TFAP2A-AS2  -     6p24.3   [Description]    (hg19-Feb_2009)
EnsemblTFAP2A-AS2 - 6p24.3 [CytoView hg19]  TFAP2A-AS2 - 6p24.3 [CytoView hg38]
Mapping of homologs : NCBITFAP2A-AS2 [Mapview hg19]  TFAP2A-AS2 [Mapview hg38]
OMIM617136   
Gene and transcription
Genbank (Entrez)KU904338 LF209760
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TFAP2A-AS2
Gene ExpressionTFAP2A-AS2 [ NCBI-GEO ]   TFAP2A-AS2 [ EBI - ARRAY_EXPRESS ]   TFAP2A-AS2 [ SEEK ]   TFAP2A-AS2 [ MEM ]
Gene Expression Viewer (FireBrowse)TFAP2A-AS2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)109729173
GTEX Portal (Tissue expression)TFAP2A-AS2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TFAP2A-AS2
DMDM Disease mutations109729173
Blocks (Seattle)TFAP2A-AS2
Protein Interaction databases
BioGRIDTFAP2A-AS2
STRING (EMBL)TFAP2A-AS2
ZODIACTFAP2A-AS2
Ontologies - Pathways
Huge Navigator TFAP2A-AS2 [HugePedia]
snp3D : Map Gene to Disease109729173
BioCentury BCIQTFAP2A-AS2
ClinGenTFAP2A-AS2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD109729173
Clinical trialTFAP2A-AS2
Miscellaneous
canSAR (ICR)TFAP2A-AS2 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTFAP2A-AS2
EVEXTFAP2A-AS2
GoPubMedTFAP2A-AS2
iHOPTFAP2A-AS2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 14:34:41 CEST 2018

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