| DOCK1 (10q26.2) / TFDP2 (3q23) | LANCL2 (7p11.2) / TFDP2 (3q23) | PLS1 (3q23) / TFDP2 (3q23) |
|
TFDP2 (3q23) / COG5 (7q22.3) | TFDP2 (3q23) / GK5 (3q23) | TFDP2 (3q23) / LANCL2 (7p11.2) |
|
TFDP2 (3q23) / PLD1 (3q26.31) | TFDP2 (3q23) / ZNF721 (4p16.3) | LANCL2 7p11.2 / TFDP2 3q23 |
|
PLS1 3q23 / TFDP2 3q23 | TFDP2 3q23 / COG5 7q22.3 | TFDP2 3q23 / GK5 3q23 |
|
TFDP2 3q23 / LANCL2 7p11.2 | TFDP2 3q23 / PLD1 3q26.31 |
| Nomenclature |
HGNC (Hugo) | TFDP2 11751 |
| Cards |
Entrez_Gene (NCBI) | TFDP2 7029 transcription factor Dp-2 |
Aliases | DP2 |
GeneCards (Weizmann) | TFDP2 |
Ensembl hg19 (Hinxton) | ENSG00000114126 [Gene_View] |
Ensembl hg38 (Hinxton) | ENSG00000114126 [Gene_View]  ENSG00000114126 [Sequence] chr3:141944428-142028665 [Contig_View] TFDP2 [Vega] |
ICGC DataPortal | ENSG00000114126 |
TCGA cBioPortal | TFDP2 |
AceView (NCBI) | TFDP2 |
Genatlas (Paris) | TFDP2 |
WikiGenes | 7029 |
SOURCE (Princeton) | TFDP2 |
Genetics Home Reference (NIH) | TFDP2 |
| Genomic and cartography |
GoldenPath hg38 (UCSC) | TFDP2 - chr3:141944428-142028665 - 3q23 [Description] (hg38-Dec_2013) |
GoldenPath hg19 (UCSC) | TFDP2 - 3q23 [Description] (hg19-Feb_2009) |
GoldenPath | TFDP2 - 3q23 [CytoView hg19] TFDP2 - 3q23 [CytoView hg38] |
ImmunoBase | ENSG00000114126 |
Mapping of homologs : NCBI | TFDP2 [Mapview hg19] TFDP2 [Mapview hg38] |
OMIM | 602160 |
| Gene and transcription |
Genbank (Entrez) | AK096450 AK303181 AK303634 AK314786 AL080206 |
RefSeq transcript (Entrez) | NM_001178138 NM_001178139 NM_001178140 NM_001178141 NM_001178142 NM_006286 |
RefSeq genomic (Entrez) | |
Consensus coding sequences : CCDS (NCBI) | TFDP2 |
Cluster EST : Unigene | Hs.379018 [ NCBI ] |
CGAP (NCI) | Hs.379018 |
Alternative Splicing Gallery | ENSG00000114126 |
Gene Expression | TFDP2 [ NCBI-GEO ] TFDP2 [ EBI - ARRAY_EXPRESS ]
TFDP2 [ SEEK ] TFDP2 [ MEM ] |
Gene Expression Viewer (FireBrowse) | TFDP2 [ Firebrowse - Broad ] |
SOURCE (Princeton) | Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60] |
Genevestigator | Expression in : [tissues]  [cell-lines]  [cancer]  [perturbations]   |
BioGPS (Tissue expression) | 7029 |
GTEX Portal (Tissue expression) | TFDP2 |
Human Protein Atlas | ENSG00000114126-TFDP2 [pathology] [cell] [tissue] |
| Protein : pattern, domain, 3D structure |
UniProt/SwissProt | Q14188 [function] [subcellular_location] [family_and_domains] [pathology_and_biotech] [ptm_processing] [expression] [interaction] |
NextProt | Q14188 [Sequence] [Exons] [Medical] [Publications] |
With graphics : InterPro | Q14188 |
Splice isoforms : SwissVar | Q14188 |
PhosPhoSitePlus | Q14188 |
Domains : Interpro (EBI) | DP-2 E2F-DP_heterodim E2F_WHTH_DNA-bd_dom TF_DP_C_sf Transc_factor_DP_C Transcrpt_fac_DP WH-like_DNA-bd_sf WH_DNA-bd_sf |
Domain families : Pfam (Sanger) | DP (PF08781) E2F_TDP (PF02319) |
Domain families : Pfam (NCBI) | pfam08781 pfam02319 |
Domain families : Smart (EMBL) | DP (SM01138) E2F_TDP (SM01372) |
Conserved Domain (NCBI) | TFDP2 |
DMDM Disease mutations | 7029 |
Blocks (Seattle) | TFDP2 |
PDB (RSDB) | 1CF7 |
PDB Europe | 1CF7 |
PDB (PDBSum) | 1CF7 |
PDB (IMB) | 1CF7 |
Structural Biology KnowledgeBase | 1CF7 |
SCOP (Structural Classification of Proteins) | 1CF7 |
CATH (Classification of proteins structures) | 1CF7 |
Superfamily | Q14188 |
Human Protein Atlas [tissue] | ENSG00000114126-TFDP2 [tissue] |
Peptide Atlas | Q14188 |
HPRD | 03696 |
IPI | IPI00029096 IPI00296752 IPI00218877 IPI00295550 IPI00915033 IPI00982683 IPI00953655 IPI00944999 IPI00945078 IPI00946984 IPI00945493 IPI00794050 IPI00984927 IPI00946020 IPI00947391 IPI00795123 IPI00946333 |
| Protein Interaction databases |
DIP (DOE-UCLA) | Q14188 |
IntAct (EBI) | Q14188 |
FunCoup | ENSG00000114126 |
BioGRID | TFDP2 |
STRING (EMBL) | TFDP2 |
ZODIAC | TFDP2 |
| Ontologies - Pathways |
QuickGO | Q14188 |
Ontology : AmiGO | regulation of transcription involved in G1/S transition of mitotic cell cycle RNA polymerase II regulatory region sequence-specific DNA binding DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription activator activity, RNA polymerase II-specific DNA binding DNA-binding transcription factor activity transcription coregulator activity protein binding nucleus nucleoplasm mitochondrion DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest heart development transcription factor binding protein domain specific binding negative regulation of transcription, DNA-templated positive regulation of transcription by RNA polymerase II positive regulation of transcription by RNA polymerase II negative regulation of G0 to G1 transition RNA polymerase II transcription factor complex positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway |
Ontology : EGO-EBI | regulation of transcription involved in G1/S transition of mitotic cell cycle RNA polymerase II regulatory region sequence-specific DNA binding DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription activator activity, RNA polymerase II-specific DNA binding DNA-binding transcription factor activity transcription coregulator activity protein binding nucleus nucleoplasm mitochondrion DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest heart development transcription factor binding protein domain specific binding negative regulation of transcription, DNA-templated positive regulation of transcription by RNA polymerase II positive regulation of transcription by RNA polymerase II negative regulation of G0 to G1 transition RNA polymerase II transcription factor complex positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway |
Pathways : KEGG | Cell cycle |
NDEx Network | TFDP2 |
Atlas of Cancer Signalling Network | TFDP2 |
Wikipedia pathways | TFDP2 |
| Orthology - Evolution |
OrthoDB | 7029 |
GeneTree (enSembl) | ENSG00000114126 |
Phylogenetic Trees/Animal Genes : TreeFam | TFDP2 |
HOGENOM | Q14188 |
Homologs : HomoloGene | TFDP2 |
Homology/Alignments : Family Browser (UCSC) | TFDP2 |
| Gene fusions - Rearrangements |
Fusion : Mitelman | LANCL2/TFDP2 [7p11.2/3q23]  [t(3;7)(q23;p11)] |
Fusion : Mitelman | TFDP2/LANCL2 [3q23/7p11.2]  [t(3;7)(q23;p11)] |
Fusion : Mitelman | TFDP2/PLD1 [3q23/3q26.31]  [t(3;3)(q23;q26)] |
Fusion Portal | LANCL2 7p11.2 TFDP2 3q23 BRCA |
Fusion Portal | PLS1 3q23 TFDP2 3q23 LUSC |
Fusion Portal | TFDP2 3q23 COG5 7q22.3 HNSC |
Fusion Portal | TFDP2 3q23 GK5 3q23 LGG |
Fusion Portal | TFDP2 3q23 LANCL2 7p11.2 BRCA |
Fusion Portal | TFDP2 3q23 PLD1 3q26.31 BRCA |
Fusion Cancer (Beijing) | TFDP2 [3q23] - ZNF721 [4p16.3] [FUSC000509] |
Fusion : Quiver | TFDP2 |
| Polymorphisms : SNP and Copy number variants |
NCBI Variation Viewer | TFDP2 [hg38] |
dbSNP Single Nucleotide Polymorphism (NCBI) | TFDP2 |
dbVar | TFDP2 |
ClinVar | TFDP2 |
1000_Genomes | TFDP2 |
Exome Variant Server | TFDP2 |
ExAC (Exome Aggregation Consortium) | ENSG00000114126 |
GNOMAD Browser | ENSG00000114126 |
Varsome Browser | TFDP2 |
Genetic variants : HAPMAP | 7029 |
Genomic Variants (DGV) | TFDP2 [DGVbeta] |
DECIPHER | TFDP2 [patients] [syndromes] [variants] [genes] |
CONAN: Copy Number Analysis | TFDP2 |
| Mutations |
ICGC Data Portal | TFDP2 |
TCGA Data Portal | TFDP2 |
Broad Tumor Portal | TFDP2 |
OASIS Portal | TFDP2 [ Somatic mutations - Copy number] |
Somatic Mutations in Cancer : COSMIC | TFDP2 [overview] [genome browser] [tissue] [distribution] |
Somatic Mutations in Cancer : COSMIC3D | TFDP2 |
Mutations and Diseases : HGMD | TFDP2 |
intOGen Portal | TFDP2 |
LOVD (Leiden Open Variation Database) | Whole genome datasets |
LOVD (Leiden Open Variation Database) | LOVD - Leiden Open Variation Database |
LOVD (Leiden Open Variation Database) | LOVD 3.0 shared installation |
BioMuta | search TFDP2 |
DgiDB (Drug Gene Interaction Database) | TFDP2 |
DoCM (Curated mutations) | TFDP2 (select the gene name) |
CIViC (Clinical Interpretations of Variants in Cancer) | TFDP2 (select a term) |
intoGen | TFDP2 |
Cancer3D | TFDP2(select the gene name) |
Impact of mutations | [PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser] |
| Diseases |
---|
OMIM | 602160 |
Orphanet | |
DisGeNET | TFDP2 |
Medgen | TFDP2 |
Genetic Testing Registry | TFDP2
|
NextProt | Q14188 [Medical] |
TSGene | 7029 |
GENETests | TFDP2 |
Target Validation | TFDP2 |
Huge Navigator |
TFDP2 [HugePedia] |
snp3D : Map Gene to Disease | 7029 |
BioCentury BCIQ | TFDP2 |
ClinGen | TFDP2 |
| Clinical trials, drugs, therapy |
---|
Chemical/Protein Interactions : CTD | 7029 |
Chemical/Pharm GKB Gene | PA36466 |
Clinical trial | TFDP2 |
| Miscellaneous |
---|
canSAR (ICR) | TFDP2 (select the gene name) |
DataMed Index | TFDP2 |
| Probes |
---|
| Litterature |
---|
PubMed | 38 Pubmed reference(s) in Entrez |
GeneRIFs | Gene References Into Functions (Entrez) |
CoreMine | TFDP2 |
EVEX | TFDP2 |
GoPubMed | TFDP2 |
iHOP | TFDP2 |