Atlas of Genetics and Cytogenetics in Oncology and Haematology


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TGCT1 (testicular germ cell tumor susceptibility 1)

Identity

Other alias-
HGNC (Hugo) TGCT1
LocusID (NCBI) 50830
Atlas_Id 42533
Location Xq27  [Link to chromosome band Xq27]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)TGCT1   13466
Cards
Entrez_Gene (NCBI)TGCT1  50830  testicular germ cell tumor susceptibility 1
Aliases
GeneCards (Weizmann)TGCT1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  - [Contig_View]  TGCT1 [Vega]
TCGA cBioPortalTGCT1
AceView (NCBI)TGCT1
Genatlas (Paris)TGCT1
WikiGenes50830
SOURCE (Princeton)TGCT1
Genetics Home Reference (NIH)TGCT1
Genomic and cartography
GoldenPath hg38 (UCSC)TGCT1  -  
GoldenPath hg19 (UCSC)TGCT1  -  
EnsemblTGCT1 - [CytoView hg19]  TGCT1 - [CytoView hg38]
Mapping of homologs : NCBITGCT1 [Mapview hg19]  TGCT1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TGCT1
Gene ExpressionTGCT1 [ NCBI-GEO ]   TGCT1 [ EBI - ARRAY_EXPRESS ]   TGCT1 [ SEEK ]   TGCT1 [ MEM ]
Gene Expression Viewer (FireBrowse)TGCT1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)50830
GTEX Portal (Tissue expression)TGCT1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TGCT1
DMDM Disease mutations50830
Blocks (Seattle)TGCT1
Protein Interaction databases
BioGRIDTGCT1
STRING (EMBL)TGCT1
ZODIACTGCT1
Ontologies - Pathways
Huge Navigator TGCT1 [HugePedia]
snp3D : Map Gene to Disease50830
BioCentury BCIQTGCT1
ClinGenTGCT1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD50830
Chemical/Pharm GKB GenePA134900185
Clinical trialTGCT1
Miscellaneous
canSAR (ICR)TGCT1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTGCT1
EVEXTGCT1
GoPubMedTGCT1
iHOPTGCT1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 14:38:16 CET 2017

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