Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

TGFB2 (transforming growth factor beta 2)

Identity

Alias_namestransforming growth factor, beta 2
Other aliasG-TSF
LDS4
TGF-beta2
HGNC (Hugo) TGFB2
LocusID (NCBI) 7042
Atlas_Id 42537
Location 1q41  [Link to chromosome band 1q41]
Location_base_pair Starts at 218345284 and ends at 218444619 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
TGFB2 (1q41) / CDH2 (18q12.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TGFB2   11768
Cards
Entrez_Gene (NCBI)TGFB2  7042  transforming growth factor beta 2
AliasesG-TSF; LDS4; TGF-beta2
GeneCards (Weizmann)TGFB2
Ensembl hg19 (Hinxton)ENSG00000092969 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000092969 [Gene_View]  ENSG00000092969 [Sequence]  chr1:218345284-218444619 [Contig_View]  TGFB2 [Vega]
ICGC DataPortalENSG00000092969
TCGA cBioPortalTGFB2
AceView (NCBI)TGFB2
Genatlas (Paris)TGFB2
WikiGenes7042
SOURCE (Princeton)TGFB2
Genetics Home Reference (NIH)TGFB2
Genomic and cartography
GoldenPath hg38 (UCSC)TGFB2  -     chr1:218345284-218444619 +  1q41   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TGFB2  -     1q41   [Description]    (hg19-Feb_2009)
GoldenPathTGFB2 - 1q41 [CytoView hg19]  TGFB2 - 1q41 [CytoView hg38]
ImmunoBaseENSG00000092969
Mapping of homologs : NCBITGFB2 [Mapview hg19]  TGFB2 [Mapview hg38]
OMIM190220   614816   
Gene and transcription
Genbank (Entrez)AB209842 AK295671 AK296504 AK299839 AK313106
RefSeq transcript (Entrez)NM_001135599 NM_003238
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TGFB2
Alternative Splicing GalleryENSG00000092969
Gene ExpressionTGFB2 [ NCBI-GEO ]   TGFB2 [ EBI - ARRAY_EXPRESS ]   TGFB2 [ SEEK ]   TGFB2 [ MEM ]
Gene Expression Viewer (FireBrowse)TGFB2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)7042
GTEX Portal (Tissue expression)TGFB2
Human Protein AtlasENSG00000092969-TGFB2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TGFB2
DMDM Disease mutations7042
Blocks (Seattle)TGFB2
Human Protein Atlas [tissue]ENSG00000092969-TGFB2 [tissue]
HPRD01828
IPIIPI00235354   IPI00220156   IPI00556200   
Protein Interaction databases
FunCoupENSG00000092969
BioGRIDTGFB2
STRING (EMBL)TGFB2
ZODIACTGFB2
Ontologies - Pathways
Huge Navigator TGFB2 [HugePedia]
snp3D : Map Gene to Disease7042
BioCentury BCIQTGFB2
ClinGenTGFB2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD7042
Chemical/Pharm GKB GenePA36482
Clinical trialTGFB2
Miscellaneous
canSAR (ICR)TGFB2 (select the gene name)
DataMed IndexTGFB2
Probes
Litterature
PubMed310 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTGFB2
EVEXTGFB2
GoPubMedTGFB2
iHOPTGFB2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Feb 19 17:12:46 CET 2020

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.