Atlas of Genetics and Cytogenetics in Oncology and Haematology


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TGFB2-OT1 (TGFB2 overlapping transcript 1)

Identity

Alias_symbol (synonym)FLJ11812
Other alias-
HGNC (Hugo) TGFB2-OT1
LocusID (NCBI) 103611157
Atlas_Id 74658
Location 1q41  [Link to chromosome band 1q41]
Location_base_pair Starts at 218615968 and ends at 218617337 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TGFB2-OT1   50629
Cards
Entrez_Gene (NCBI)TGFB2-OT1  103611157  TGFB2 overlapping transcript 1
Aliases
GeneCards (Weizmann)TGFB2-OT1
Ensembl hg19 (Hinxton)ENSG00000281453 [Gene_View]  chr1:218615968-218617337 [Contig_View]  TGFB2-OT1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000281453 [Gene_View]  chr1:218615968-218617337 [Contig_View]  TGFB2-OT1 [Vega]
ICGC DataPortalENSG00000281453
TCGA cBioPortalTGFB2-OT1
AceView (NCBI)TGFB2-OT1
Genatlas (Paris)TGFB2-OT1
WikiGenes103611157
SOURCE (Princeton)TGFB2-OT1
Genetics Home Reference (NIH)TGFB2-OT1
Genomic and cartography
GoldenPath hg19 (UCSC)TGFB2-OT1  -     chr1:218615968-218617337 +  1q41   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)TGFB2-OT1  -     1q41   [Description]    (hg38-Dec_2013)
EnsemblTGFB2-OT1 - 1q41 [CytoView hg19]  TGFB2-OT1 - 1q41 [CytoView hg38]
Mapping of homologs : NCBITGFB2-OT1 [Mapview hg19]  TGFB2-OT1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK021874
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000001 NC_018912 NG_027721 NT_004487 NW_004929294
Consensus coding sequences : CCDS (NCBI)TGFB2-OT1
Cluster EST : UnigeneHs.133379 [ NCBI ]
CGAP (NCI)Hs.133379
Alternative Splicing GalleryENSG00000281453
Gene ExpressionTGFB2-OT1 [ NCBI-GEO ]   TGFB2-OT1 [ EBI - ARRAY_EXPRESS ]   TGFB2-OT1 [ SEEK ]   TGFB2-OT1 [ MEM ]
Gene Expression Viewer (FireBrowse)TGFB2-OT1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)103611157
GTEX Portal (Tissue expression)TGFB2-OT1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TGFB2-OT1
DMDM Disease mutations103611157
Blocks (Seattle)TGFB2-OT1
Human Protein AtlasENSG00000281453
Protein Interaction databases
FunCoupENSG00000281453
BioGRIDTGFB2-OT1
STRING (EMBL)TGFB2-OT1
ZODIACTGFB2-OT1
Ontologies - Pathways
Huge Navigator TGFB2-OT1 [HugePedia]
snp3D : Map Gene to Disease103611157
BioCentury BCIQTGFB2-OT1
ClinGenTGFB2-OT1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD103611157
Clinical trialTGFB2-OT1
Miscellaneous
canSAR (ICR)TGFB2-OT1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTGFB2-OT1
EVEXTGFB2-OT1
GoPubMedTGFB2-OT1
iHOPTGFB2-OT1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:47:58 CET 2017

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