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TH2LCRR (T helper type 2 locus control region associated RNA)

Identity

Alias_symbol (synonym)TH2-LCR
Other alias
HGNC (Hugo) TH2LCRR
LocusID (NCBI) 101927761
Atlas_Id 77790
Location 5q31.1  [Link to chromosome band 5q31]
Location_base_pair Starts at 132630589 and ends at 132641790 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TH2LCRR   40495
Cards
Entrez_Gene (NCBI)TH2LCRR  101927761  T helper type 2 locus control region associated RNA
AliasesTH2-LCR
GeneCards (Weizmann)TH2LCRR
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr5:132630589-132641790 [Contig_View]  TH2LCRR [Vega]
TCGA cBioPortalTH2LCRR
AceView (NCBI)TH2LCRR
Genatlas (Paris)TH2LCRR
WikiGenes101927761
SOURCE (Princeton)TH2LCRR
Genetics Home Reference (NIH)TH2LCRR
Genomic and cartography
GoldenPath hg38 (UCSC)TH2LCRR  -     chr5:132630589-132641790 -  5q31.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TH2LCRR  -     5q31.1   [Description]    (hg19-Feb_2009)
EnsemblTH2LCRR - 5q31.1 [CytoView hg19]  TH2LCRR - 5q31.1 [CytoView hg38]
Mapping of homologs : NCBITH2LCRR [Mapview hg19]  TH2LCRR [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA470013 AA496113 BC042122 BX095327 DB527752
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TH2LCRR
Cluster EST : UnigeneHs.598812 [ NCBI ]
CGAP (NCI)Hs.598812
Gene ExpressionTH2LCRR [ NCBI-GEO ]   TH2LCRR [ EBI - ARRAY_EXPRESS ]   TH2LCRR [ SEEK ]   TH2LCRR [ MEM ]
Gene Expression Viewer (FireBrowse)TH2LCRR [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927761
GTEX Portal (Tissue expression)TH2LCRR
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TH2LCRR
DMDM Disease mutations101927761
Blocks (Seattle)TH2LCRR
Protein Interaction databases
BioGRIDTH2LCRR
STRING (EMBL)TH2LCRR
ZODIACTH2LCRR
Ontologies - Pathways
Huge Navigator TH2LCRR [HugePedia]
snp3D : Map Gene to Disease101927761
BioCentury BCIQTH2LCRR
ClinGenTH2LCRR
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927761
Clinical trialTH2LCRR
Miscellaneous
canSAR (ICR)TH2LCRR (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTH2LCRR
EVEXTH2LCRR
GoPubMedTH2LCRR
iHOPTH2LCRR
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:13:14 CET 2017

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