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TH2LCRR (T helper type 2 locus control region associated RNA)

Identity

Alias (NCBI)TH2-LCR
HGNC (Hugo) TH2LCRR
HGNC Alias symbTH2-LCR
LocusID (NCBI) 101927761
Atlas_Id 77790
Location 5q31.1  [Link to chromosome band 5q31]
Location_base_pair Starts at 132638048 and ends at 132655892 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)TH2LCRR   40495
Cards
Entrez_Gene (NCBI)TH2LCRR    T helper type 2 locus control region associated RNA
AliasesTH2-LCR
GeneCards (Weizmann)TH2LCRR
Ensembl hg19 (Hinxton)ENSG00000223442 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000223442 [Gene_View]  ENSG00000223442 [Sequence]  chr5:132638048-132655892 [Contig_View]  TH2LCRR [Vega]
ICGC DataPortalENSG00000223442
TCGA cBioPortalTH2LCRR
AceView (NCBI)TH2LCRR
Genatlas (Paris)TH2LCRR
SOURCE (Princeton)TH2LCRR
Genetics Home Reference (NIH)TH2LCRR
Genomic and cartography
GoldenPath hg38 (UCSC)TH2LCRR  -     chr5:132638048-132655892 -  5q31.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TH2LCRR  -     5q31.1   [Description]    (hg19-Feb_2009)
GoldenPathTH2LCRR - 5q31.1 [CytoView hg19]  TH2LCRR - 5q31.1 [CytoView hg38]
ImmunoBaseENSG00000223442
Genome Data Viewer NCBITH2LCRR [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AA470013 AA496113 BC042122 BX095327 DB527752
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)TH2LCRR
Gene ExpressionTH2LCRR [ NCBI-GEO ]   TH2LCRR [ EBI - ARRAY_EXPRESS ]   TH2LCRR [ SEEK ]   TH2LCRR [ MEM ]
Gene Expression Viewer (FireBrowse)TH2LCRR [ Firebrowse - Broad ]
GenevisibleExpression of TH2LCRR in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)101927761
GTEX Portal (Tissue expression)TH2LCRR
Human Protein AtlasENSG00000223442-TH2LCRR [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TH2LCRR
Human Protein Atlas [tissue]ENSG00000223442-TH2LCRR [tissue]
Protein Interaction databases
BioGRIDTH2LCRR
STRING (EMBL)TH2LCRR
ZODIACTH2LCRR
Ontologies - Pathways
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTH2LCRR
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:25:25 CEST 2021

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