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THAP10 (THAP domain containing 10)

Identity

Alias (NCBI)-
HGNC (Hugo) THAP10
LocusID (NCBI) 56906
Atlas_Id 74664
Location 15q23  [Link to chromosome band 15q23]
Location_base_pair Starts at 70881342 and ends at 70892433 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
TLE3 (15q23) / THAP10 (15q23)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)THAP10   23193
Cards
Entrez_Gene (NCBI)THAP10    THAP domain containing 10
Aliases
GeneCards (Weizmann)THAP10
Ensembl hg19 (Hinxton)ENSG00000129028 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000129028 [Gene_View]  ENSG00000129028 [Sequence]  chr15:70881342-70892433 [Contig_View]  THAP10 [Vega]
ICGC DataPortalENSG00000129028
TCGA cBioPortalTHAP10
AceView (NCBI)THAP10
Genatlas (Paris)THAP10
SOURCE (Princeton)THAP10
Genetics Home Reference (NIH)THAP10
Genomic and cartography
GoldenPath hg38 (UCSC)THAP10  -     chr15:70881342-70892433 -  15q23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)THAP10  -     15q23   [Description]    (hg19-Feb_2009)
GoldenPathTHAP10 - 15q23 [CytoView hg19]  THAP10 - 15q23 [CytoView hg38]
ImmunoBaseENSG00000129028
Genome Data Viewer NCBITHAP10 [Mapview hg19]  
OMIM612538   
Gene and transcription
Genbank (Entrez)AK313472 AL360202 BC027857 BC072414 DA272000
RefSeq transcript (Entrez)NM_020147
Consensus coding sequences : CCDS (NCBI)THAP10
Gene ExpressionTHAP10 [ NCBI-GEO ]   THAP10 [ EBI - ARRAY_EXPRESS ]   THAP10 [ SEEK ]   THAP10 [ MEM ]
Gene Expression Viewer (FireBrowse)THAP10 [ Firebrowse - Broad ]
GenevisibleExpression of THAP10 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)56906
GTEX Portal (Tissue expression)THAP10
Human Protein AtlasENSG00000129028-THAP10 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9P2Z0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9P2Z0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9P2Z0
PhosPhoSitePlusQ9P2Z0
Domaine pattern : Prosite (Expaxy)ZF_THAP (PS50950)   
Domains : Interpro (EBI)THAP_Znf    THAP_Znf_sf   
Domain families : Pfam (Sanger)THAP (PF05485)   
Domain families : Pfam (NCBI)pfam05485   
Domain families : Smart (EMBL)DM3 (SM00692)  THAP (SM00980)  
Conserved Domain (NCBI)THAP10
SuperfamilyQ9P2Z0
AlphaFold pdb e-kbQ9P2Z0   
Human Protein Atlas [tissue]ENSG00000129028-THAP10 [tissue]
HPRD15497
Protein Interaction databases
DIP (DOE-UCLA)Q9P2Z0
IntAct (EBI)Q9P2Z0
BioGRIDTHAP10
STRING (EMBL)THAP10
ZODIACTHAP10
Ontologies - Pathways
QuickGOQ9P2Z0
Ontology : AmiGODNA binding  protein binding  metal ion binding  
Ontology : EGO-EBIDNA binding  protein binding  metal ion binding  
NDEx NetworkTHAP10
Atlas of Cancer Signalling NetworkTHAP10
Wikipedia pathwaysTHAP10
Orthology - Evolution
OrthoDB56906
GeneTree (enSembl)ENSG00000129028
Phylogenetic Trees/Animal Genes : TreeFamTHAP10
Homologs : HomoloGeneTHAP10
Homology/Alignments : Family Browser (UCSC)THAP10
Gene fusions - Rearrangements
Fusion : QuiverTHAP10
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTHAP10 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)THAP10
dbVarTHAP10
ClinVarTHAP10
MonarchTHAP10
1000_GenomesTHAP10 
Exome Variant ServerTHAP10
GNOMAD BrowserENSG00000129028
Varsome BrowserTHAP10
ACMGTHAP10 variants
VarityQ9P2Z0
Genomic Variants (DGV)THAP10 [DGVbeta]
DECIPHERTHAP10 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTHAP10 
Mutations
ICGC Data PortalTHAP10 
TCGA Data PortalTHAP10 
Broad Tumor PortalTHAP10
OASIS PortalTHAP10 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTHAP10  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTHAP10
Mutations and Diseases : HGMDTHAP10
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTHAP10
DgiDB (Drug Gene Interaction Database)THAP10
DoCM (Curated mutations)THAP10
CIViC (Clinical Interpretations of Variants in Cancer)THAP10
Cancer3DTHAP10
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612538   
Orphanet
DisGeNETTHAP10
MedgenTHAP10
Genetic Testing Registry THAP10
NextProtQ9P2Z0 [Medical]
GENETestsTHAP10
Target ValidationTHAP10
Huge Navigator THAP10 [HugePedia]
ClinGenTHAP10
Clinical trials, drugs, therapy
MyCancerGenomeTHAP10
Protein Interactions : CTDTHAP10
Pharm GKB GenePA134988462
PharosQ9P2Z0
Clinical trialTHAP10
Miscellaneous
canSAR (ICR)THAP10
HarmonizomeTHAP10
DataMed IndexTHAP10
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTHAP10
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:25:25 CEST 2021

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