Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

THAP5P1 (THAP domain containing 5 pseudogene 1)

Identity

Other alias-
HGNC (Hugo) THAP5P1
LocusID (NCBI) 285872
Atlas_Id 77093
Location 7q36.3  [Link to chromosome band 7q36]
Location_base_pair Starts at 158622175 and ends at 158624940 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)THAP5P1   22340
Cards
Entrez_Gene (NCBI)THAP5P1  285872  THAP domain containing 5 pseudogene 1
Aliases
GeneCards (Weizmann)THAP5P1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr7:158622175-158624940 [Contig_View]  THAP5P1 [Vega]
TCGA cBioPortalTHAP5P1
AceView (NCBI)THAP5P1
Genatlas (Paris)THAP5P1
WikiGenes285872
SOURCE (Princeton)THAP5P1
Genetics Home Reference (NIH)THAP5P1
Genomic and cartography
GoldenPath hg38 (UCSC)THAP5P1  -     chr7:158622175-158624940 -  7q36.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)THAP5P1  -     7q36.3   [Description]    (hg19-Feb_2009)
EnsemblTHAP5P1 - 7q36.3 [CytoView hg19]  THAP5P1 - 7q36.3 [CytoView hg38]
Mapping of homologs : NCBITHAP5P1 [Mapview hg19]  THAP5P1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK126609
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)THAP5P1
Cluster EST : UnigeneHs.490790 [ NCBI ]
CGAP (NCI)Hs.490790
Gene ExpressionTHAP5P1 [ NCBI-GEO ]   THAP5P1 [ EBI - ARRAY_EXPRESS ]   THAP5P1 [ SEEK ]   THAP5P1 [ MEM ]
Gene Expression Viewer (FireBrowse)THAP5P1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)285872
GTEX Portal (Tissue expression)THAP5P1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)THAP5P1
DMDM Disease mutations285872
Blocks (Seattle)THAP5P1
Protein Interaction databases
BioGRIDTHAP5P1
STRING (EMBL)THAP5P1
ZODIACTHAP5P1
Ontologies - Pathways
Huge Navigator THAP5P1 [HugePedia]
snp3D : Map Gene to Disease285872
BioCentury BCIQTHAP5P1
ClinGenTHAP5P1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD285872
Clinical trialTHAP5P1
Miscellaneous
canSAR (ICR)THAP5P1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTHAP5P1
EVEXTHAP5P1
GoPubMedTHAP5P1
iHOPTHAP5P1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 20:17:56 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.