Atlas of Genetics and Cytogenetics in Oncology and Haematology


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THAP7-AS1 (THAP7 antisense RNA 1)

Identity

Alias_namesTHAP7 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) THAP7-AS1
LocusID (NCBI) 439931
Atlas_Id 74669
Location 22q11.21  [Link to chromosome band 22q11]
Location_base_pair Starts at 21001922 and ends at 21010374 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
SLC19A2 (1q24.2) / THAP7-AS1 (22q11.21)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)THAP7-AS1   41013
Cards
Entrez_Gene (NCBI)THAP7-AS1  439931  THAP7 antisense RNA 1
Aliases
GeneCards (Weizmann)THAP7-AS1
Ensembl hg19 (Hinxton)ENSG00000230513 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000230513 [Gene_View]  chr22:21001922-21010374 [Contig_View]  THAP7-AS1 [Vega]
ICGC DataPortalENSG00000230513
TCGA cBioPortalTHAP7-AS1
AceView (NCBI)THAP7-AS1
Genatlas (Paris)THAP7-AS1
WikiGenes439931
SOURCE (Princeton)THAP7-AS1
Genetics Home Reference (NIH)THAP7-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)THAP7-AS1  -     chr22:21001922-21010374 +  22q11.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)THAP7-AS1  -     22q11.21   [Description]    (hg19-Feb_2009)
EnsemblTHAP7-AS1 - 22q11.21 [CytoView hg19]  THAP7-AS1 - 22q11.21 [CytoView hg38]
Mapping of homologs : NCBITHAP7-AS1 [Mapview hg19]  THAP7-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK096901 AK097739 AW291941 BC065749 BC110368
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)THAP7-AS1
Cluster EST : UnigeneHs.517430 [ NCBI ]
CGAP (NCI)Hs.517430
Alternative Splicing GalleryENSG00000230513
Gene ExpressionTHAP7-AS1 [ NCBI-GEO ]   THAP7-AS1 [ EBI - ARRAY_EXPRESS ]   THAP7-AS1 [ SEEK ]   THAP7-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)THAP7-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)439931
GTEX Portal (Tissue expression)THAP7-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)THAP7-AS1
DMDM Disease mutations439931
Blocks (Seattle)THAP7-AS1
Human Protein AtlasENSG00000230513
IPIIPI00744322   IPI00892644   
Protein Interaction databases
FunCoupENSG00000230513
BioGRIDTHAP7-AS1
STRING (EMBL)THAP7-AS1
ZODIACTHAP7-AS1
Ontologies - Pathways
Huge Navigator THAP7-AS1 [HugePedia]
snp3D : Map Gene to Disease439931
BioCentury BCIQTHAP7-AS1
ClinGenTHAP7-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD439931
Clinical trialTHAP7-AS1
Miscellaneous
canSAR (ICR)THAP7-AS1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTHAP7-AS1
EVEXTHAP7-AS1
GoPubMedTHAP7-AS1
iHOPTHAP7-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:45:25 CEST 2017

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