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THEG (theg spermatid protein)

Identity

Alias_namesTheg homolog (mouse)
Alias_symbol (synonym)CT56
THEG1
Other alias
HGNC (Hugo) THEG
LocusID (NCBI) 51298
Atlas_Id 74672
Location 19p13.3  [Link to chromosome band 19p13]
Location_base_pair Starts at 362057 and ends at 376013 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)THEG   13706
Cards
Entrez_Gene (NCBI)THEG  51298  theg spermatid protein
AliasesCT56; THEG1
GeneCards (Weizmann)THEG
Ensembl hg19 (Hinxton)ENSG00000105549 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000105549 [Gene_View]  chr19:362057-376013 [Contig_View]  THEG [Vega]
ICGC DataPortalENSG00000105549
TCGA cBioPortalTHEG
AceView (NCBI)THEG
Genatlas (Paris)THEG
WikiGenes51298
SOURCE (Princeton)THEG
Genetics Home Reference (NIH)THEG
Genomic and cartography
GoldenPath hg38 (UCSC)THEG  -     chr19:362057-376013 -  19p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)THEG  -     19p13.3   [Description]    (hg19-Feb_2009)
EnsemblTHEG - 19p13.3 [CytoView hg19]  THEG - 19p13.3 [CytoView hg38]
Mapping of homologs : NCBITHEG [Mapview hg19]  THEG [Mapview hg38]
OMIM609503   
Gene and transcription
Genbank (Entrez)AB033129 AF268610 BC028574 DQ890895 DQ894049
RefSeq transcript (Entrez)NM_016585 NM_199202
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)THEG
Cluster EST : UnigeneHs.250002 [ NCBI ]
CGAP (NCI)Hs.250002
Alternative Splicing GalleryENSG00000105549
Gene ExpressionTHEG [ NCBI-GEO ]   THEG [ EBI - ARRAY_EXPRESS ]   THEG [ SEEK ]   THEG [ MEM ]
Gene Expression Viewer (FireBrowse)THEG [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51298
GTEX Portal (Tissue expression)THEG
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9P2T0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9P2T0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9P2T0
Splice isoforms : SwissVarQ9P2T0
PhosPhoSitePlusQ9P2T0
Domains : Interpro (EBI)THEG   
Domain families : Pfam (Sanger)THEG (PF14912)   
Domain families : Pfam (NCBI)pfam14912   
Domain families : Smart (EMBL)THEG (SM00705)  
Conserved Domain (NCBI)THEG
DMDM Disease mutations51298
Blocks (Seattle)THEG
SuperfamilyQ9P2T0
Human Protein AtlasENSG00000105549
Peptide AtlasQ9P2T0
HPRD15503
IPIIPI00009859   IPI00397946   IPI00984421   
Protein Interaction databases
DIP (DOE-UCLA)Q9P2T0
IntAct (EBI)Q9P2T0
FunCoupENSG00000105549
BioGRIDTHEG
STRING (EMBL)THEG
ZODIACTHEG
Ontologies - Pathways
QuickGOQ9P2T0
Ontology : AmiGOprotein binding  nucleus  multicellular organism development  spermatogenesis  cell differentiation  chaperone-mediated protein complex assembly  
Ontology : EGO-EBIprotein binding  nucleus  multicellular organism development  spermatogenesis  cell differentiation  chaperone-mediated protein complex assembly  
NDEx NetworkTHEG
Atlas of Cancer Signalling NetworkTHEG
Wikipedia pathwaysTHEG
Orthology - Evolution
OrthoDB51298
GeneTree (enSembl)ENSG00000105549
Phylogenetic Trees/Animal Genes : TreeFamTHEG
HOVERGENQ9P2T0
HOGENOMQ9P2T0
Homologs : HomoloGeneTHEG
Homology/Alignments : Family Browser (UCSC)THEG
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTHEG [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)THEG
dbVarTHEG
ClinVarTHEG
1000_GenomesTHEG 
Exome Variant ServerTHEG
ExAC (Exome Aggregation Consortium)THEG (select the gene name)
Genetic variants : HAPMAP51298
Genomic Variants (DGV)THEG [DGVbeta]
DECIPHERTHEG [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTHEG 
Mutations
ICGC Data PortalTHEG 
TCGA Data PortalTHEG 
Broad Tumor PortalTHEG
OASIS PortalTHEG [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTHEG  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTHEG
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch THEG
DgiDB (Drug Gene Interaction Database)THEG
DoCM (Curated mutations)THEG (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)THEG (select a term)
intoGenTHEG
Cancer3DTHEG(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609503   
Orphanet
MedgenTHEG
Genetic Testing Registry THEG
NextProtQ9P2T0 [Medical]
TSGene51298
GENETestsTHEG
Huge Navigator THEG [HugePedia]
snp3D : Map Gene to Disease51298
BioCentury BCIQTHEG
ClinGenTHEG
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD51298
Chemical/Pharm GKB GenePA134953737
Clinical trialTHEG
Miscellaneous
canSAR (ICR)THEG (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTHEG
EVEXTHEG
GoPubMedTHEG
iHOPTHEG
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 11:57:56 CEST 2017

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