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THEG (theg spermatid protein)

Identity

Alias (NCBI)CT56
THEG1
HGNC (Hugo) THEG
HGNC Alias symbCT56
THEG1
HGNC Alias namecancer/testis antigen 56
HGNC Previous nameTheg homolog (mouse)
LocusID (NCBI) 51298
Atlas_Id 74672
Location 19p13.3  [Link to chromosome band 19p13]
Location_base_pair Starts at 361747 and ends at 376026 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)THEG   13706
Cards
Entrez_Gene (NCBI)THEG    theg spermatid protein
AliasesCT56; THEG1
GeneCards (Weizmann)THEG
Ensembl hg19 (Hinxton)ENSG00000105549 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000105549 [Gene_View]  ENSG00000105549 [Sequence]  chr19:361747-376026 [Contig_View]  THEG [Vega]
ICGC DataPortalENSG00000105549
TCGA cBioPortalTHEG
AceView (NCBI)THEG
Genatlas (Paris)THEG
SOURCE (Princeton)THEG
Genetics Home Reference (NIH)THEG
Genomic and cartography
GoldenPath hg38 (UCSC)THEG  -     chr19:361747-376026 -  19p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)THEG  -     19p13.3   [Description]    (hg19-Feb_2009)
GoldenPathTHEG - 19p13.3 [CytoView hg19]  THEG - 19p13.3 [CytoView hg38]
ImmunoBaseENSG00000105549
Genome Data Viewer NCBITHEG [Mapview hg19]  
OMIM609503   
Gene and transcription
Genbank (Entrez)AB033129 AF268610 BC028574 DR731298
RefSeq transcript (Entrez)NM_016585 NM_199202
Consensus coding sequences : CCDS (NCBI)THEG
Gene ExpressionTHEG [ NCBI-GEO ]   THEG [ EBI - ARRAY_EXPRESS ]   THEG [ SEEK ]   THEG [ MEM ]
Gene Expression Viewer (FireBrowse)THEG [ Firebrowse - Broad ]
GenevisibleExpression of THEG in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51298
GTEX Portal (Tissue expression)THEG
Human Protein AtlasENSG00000105549-THEG [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9P2T0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9P2T0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9P2T0
PhosPhoSitePlusQ9P2T0
Domains : Interpro (EBI)THEG    THEG-like   
Domain families : Pfam (Sanger)THEG (PF14912)   
Domain families : Pfam (NCBI)pfam14912   
Domain families : Smart (EMBL)THEG (SM00705)  
Conserved Domain (NCBI)THEG
SuperfamilyQ9P2T0
AlphaFold pdb e-kbQ9P2T0   
Human Protein Atlas [tissue]ENSG00000105549-THEG [tissue]
HPRD15503
Protein Interaction databases
DIP (DOE-UCLA)Q9P2T0
IntAct (EBI)Q9P2T0
BioGRIDTHEG
STRING (EMBL)THEG
ZODIACTHEG
Ontologies - Pathways
QuickGOQ9P2T0
Ontology : AmiGOprotein binding  nucleus  multicellular organism development  spermatogenesis  cell differentiation  chaperone-mediated protein complex assembly  
Ontology : EGO-EBIprotein binding  nucleus  multicellular organism development  spermatogenesis  cell differentiation  chaperone-mediated protein complex assembly  
NDEx NetworkTHEG
Atlas of Cancer Signalling NetworkTHEG
Wikipedia pathwaysTHEG
Orthology - Evolution
OrthoDB51298
GeneTree (enSembl)ENSG00000105549
Phylogenetic Trees/Animal Genes : TreeFamTHEG
Homologs : HomoloGeneTHEG
Homology/Alignments : Family Browser (UCSC)THEG
Gene fusions - Rearrangements
Fusion : QuiverTHEG
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTHEG [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)THEG
dbVarTHEG
ClinVarTHEG
MonarchTHEG
1000_GenomesTHEG 
Exome Variant ServerTHEG
GNOMAD BrowserENSG00000105549
Varsome BrowserTHEG
ACMGTHEG variants
VarityQ9P2T0
Genomic Variants (DGV)THEG [DGVbeta]
DECIPHERTHEG [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTHEG 
Mutations
ICGC Data PortalTHEG 
TCGA Data PortalTHEG 
Broad Tumor PortalTHEG
OASIS PortalTHEG [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTHEG  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTHEG
Mutations and Diseases : HGMDTHEG
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTHEG
DgiDB (Drug Gene Interaction Database)THEG
DoCM (Curated mutations)THEG
CIViC (Clinical Interpretations of Variants in Cancer)THEG
Cancer3DTHEG
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609503   
Orphanet
DisGeNETTHEG
MedgenTHEG
Genetic Testing Registry THEG
NextProtQ9P2T0 [Medical]
GENETestsTHEG
Target ValidationTHEG
Huge Navigator THEG [HugePedia]
ClinGenTHEG
Clinical trials, drugs, therapy
MyCancerGenomeTHEG
Protein Interactions : CTDTHEG
Pharm GKB GenePA134953737
PharosQ9P2T0
Clinical trialTHEG
Miscellaneous
canSAR (ICR)THEG
HarmonizomeTHEG
DataMed IndexTHEG
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTHEG
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:25:27 CEST 2021

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