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THEGL (theg spermatid protein-like)

Identity

Other alias-
HGNC (Hugo) THEGL
LocusID (NCBI) 100506564
Atlas_Id 74674
Location 4q12  [Link to chromosome band 4q12]
Location_base_pair Starts at 57396775 and ends at 57469489 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)THEGL   43771
Cards
Entrez_Gene (NCBI)THEGL  100506564  theg spermatid protein-like
Aliases
GeneCards (Weizmann)THEGL
Ensembl hg19 (Hinxton)ENSG00000249693 [Gene_View]  chr4:57396775-57469489 [Contig_View]  THEGL [Vega]
Ensembl hg38 (Hinxton)ENSG00000249693 [Gene_View]  chr4:57396775-57469489 [Contig_View]  THEGL [Vega]
ICGC DataPortalENSG00000249693
TCGA cBioPortalTHEGL
AceView (NCBI)THEGL
Genatlas (Paris)THEGL
WikiGenes100506564
SOURCE (Princeton)THEGL
Genetics Home Reference (NIH)THEGL
Genomic and cartography
GoldenPath hg19 (UCSC)THEGL  -     chr4:57396775-57469489 +  4q12   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)THEGL  -     4q12   [Description]    (hg38-Dec_2013)
EnsemblTHEGL - 4q12 [CytoView hg19]  THEGL - 4q12 [CytoView hg38]
Mapping of homologs : NCBITHEGL [Mapview hg19]  THEGL [Mapview hg38]
Gene and transcription
Genbank (Entrez)AL833514 DB450279 DW009623 DY655427 DY655539
RefSeq transcript (Entrez)NM_001256475
RefSeq genomic (Entrez)NC_000004 NC_018915 NT_022853 NW_004929319
Consensus coding sequences : CCDS (NCBI)THEGL
Cluster EST : UnigeneHs.638565 [ NCBI ]
CGAP (NCI)Hs.638565
Alternative Splicing GalleryENSG00000249693
Gene ExpressionTHEGL [ NCBI-GEO ]   THEGL [ EBI - ARRAY_EXPRESS ]   THEGL [ SEEK ]   THEGL [ MEM ]
Gene Expression Viewer (FireBrowse)THEGL [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100506564
GTEX Portal (Tissue expression)THEGL
Protein : pattern, domain, 3D structure
UniProt/SwissProtP0DJG4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP0DJG4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP0DJG4
Splice isoforms : SwissVarP0DJG4
PhosPhoSitePlusP0DJG4
Domains : Interpro (EBI)THEG   
Domain families : Pfam (Sanger)THEG (PF14912)   
Domain families : Pfam (NCBI)pfam14912   
Domain families : Smart (EMBL)THEG (SM00705)  
Conserved Domain (NCBI)THEGL
DMDM Disease mutations100506564
Blocks (Seattle)THEGL
SuperfamilyP0DJG4
Human Protein AtlasENSG00000249693
Peptide AtlasP0DJG4
Protein Interaction databases
DIP (DOE-UCLA)P0DJG4
IntAct (EBI)P0DJG4
FunCoupENSG00000249693
BioGRIDTHEGL
STRING (EMBL)THEGL
ZODIACTHEGL
Ontologies - Pathways
QuickGOP0DJG4
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkTHEGL
Atlas of Cancer Signalling NetworkTHEGL
Wikipedia pathwaysTHEGL
Orthology - Evolution
OrthoDB100506564
GeneTree (enSembl)ENSG00000249693
Phylogenetic Trees/Animal Genes : TreeFamTHEGL
HOVERGENP0DJG4
HOGENOMP0DJG4
Homologs : HomoloGeneTHEGL
Homology/Alignments : Family Browser (UCSC)THEGL
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTHEGL [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)THEGL
dbVarTHEGL
ClinVarTHEGL
1000_GenomesTHEGL 
Exome Variant ServerTHEGL
ExAC (Exome Aggregation Consortium)THEGL (select the gene name)
Genetic variants : HAPMAP100506564
Genomic Variants (DGV)THEGL [DGVbeta]
DECIPHER (Syndromes)4:57396775-57469489  ENSG00000249693
CONAN: Copy Number AnalysisTHEGL 
Mutations
ICGC Data PortalTHEGL 
TCGA Data PortalTHEGL 
Broad Tumor PortalTHEGL
OASIS PortalTHEGL [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTHEGL  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTHEGL
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch THEGL
DgiDB (Drug Gene Interaction Database)THEGL
DoCM (Curated mutations)THEGL (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)THEGL (select a term)
intoGenTHEGL
Cancer3DTHEGL(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTHEGL
Genetic Testing Registry THEGL
NextProtP0DJG4 [Medical]
TSGene100506564
GENETestsTHEGL
Huge Navigator THEGL [HugePedia]
snp3D : Map Gene to Disease100506564
BioCentury BCIQTHEGL
ClinGenTHEGL
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506564
Clinical trialTHEGL
Miscellaneous
canSAR (ICR)THEGL (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTHEGL
EVEXTHEGL
GoPubMedTHEGL
iHOPTHEGL
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:48:02 CET 2017

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