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THEM6 (thioesterase superfamily member 6)

Identity

Alias (NCBI)C8orf55
DSCD75
HGNC (Hugo) THEM6
HGNC Alias symbDSCD75
HGNC Previous nameC8orf55
HGNC Previous namechromosome 8 open reading frame 55
LocusID (NCBI) 51337
Atlas_Id 41179
Location 8q24.3  [Link to chromosome band 8q24]
Location_base_pair Starts at 142727223 and ends at 142736927 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ZNF204P (6p22.1) / THEM6 (8q24.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)THEM6   29656
Cards
Entrez_Gene (NCBI)THEM6    thioesterase superfamily member 6
AliasesC8orf55; DSCD75
GeneCards (Weizmann)THEM6
Ensembl hg19 (Hinxton)ENSG00000130193 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000130193 [Gene_View]  ENSG00000130193 [Sequence]  chr8:142727223-142736927 [Contig_View]  THEM6 [Vega]
ICGC DataPortalENSG00000130193
TCGA cBioPortalTHEM6
AceView (NCBI)THEM6
Genatlas (Paris)THEM6
SOURCE (Princeton)THEM6
Genetics Home Reference (NIH)THEM6
Genomic and cartography
GoldenPath hg38 (UCSC)THEM6  -     chr8:142727223-142736927 +  8q24.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)THEM6  -     8q24.3   [Description]    (hg19-Feb_2009)
GoldenPathTHEM6 - 8q24.3 [CytoView hg19]  THEM6 - 8q24.3 [CytoView hg38]
ImmunoBaseENSG00000130193
Genome Data Viewer NCBITHEM6 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AF242773 AK055140 AK075407 AK301564 AK315614
RefSeq transcript (Entrez)NM_001363000 NM_016647
Consensus coding sequences : CCDS (NCBI)THEM6
Gene ExpressionTHEM6 [ NCBI-GEO ]   THEM6 [ EBI - ARRAY_EXPRESS ]   THEM6 [ SEEK ]   THEM6 [ MEM ]
Gene Expression Viewer (FireBrowse)THEM6 [ Firebrowse - Broad ]
GenevisibleExpression of THEM6 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51337
GTEX Portal (Tissue expression)THEM6
Human Protein AtlasENSG00000130193-THEM6 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8WUY1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8WUY1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8WUY1
PhosPhoSitePlusQ8WUY1
Domains : Interpro (EBI)HotDog_dom_sf   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)THEM6
SuperfamilyQ8WUY1
AlphaFold pdb e-kbQ8WUY1   
Human Protein Atlas [tissue]ENSG00000130193-THEM6 [tissue]
HPRD14241
Protein Interaction databases
DIP (DOE-UCLA)Q8WUY1
IntAct (EBI)Q8WUY1
BioGRIDTHEM6
STRING (EMBL)THEM6
ZODIACTHEM6
Ontologies - Pathways
QuickGOQ8WUY1
Ontology : AmiGOextracellular region  
Ontology : EGO-EBIextracellular region  
NDEx NetworkTHEM6
Atlas of Cancer Signalling NetworkTHEM6
Wikipedia pathwaysTHEM6
Orthology - Evolution
OrthoDB51337
GeneTree (enSembl)ENSG00000130193
Phylogenetic Trees/Animal Genes : TreeFamTHEM6
Homologs : HomoloGeneTHEM6
Homology/Alignments : Family Browser (UCSC)THEM6
Gene fusions - Rearrangements
Fusion : QuiverTHEM6
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTHEM6 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)THEM6
dbVarTHEM6
ClinVarTHEM6
MonarchTHEM6
1000_GenomesTHEM6 
Exome Variant ServerTHEM6
GNOMAD BrowserENSG00000130193
Varsome BrowserTHEM6
ACMGTHEM6 variants
VarityQ8WUY1
Genomic Variants (DGV)THEM6 [DGVbeta]
DECIPHERTHEM6 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTHEM6 
Mutations
ICGC Data PortalTHEM6 
TCGA Data PortalTHEM6 
Broad Tumor PortalTHEM6
OASIS PortalTHEM6 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTHEM6  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTHEM6
Mutations and Diseases : HGMDTHEM6
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTHEM6
DgiDB (Drug Gene Interaction Database)THEM6
DoCM (Curated mutations)THEM6
CIViC (Clinical Interpretations of Variants in Cancer)THEM6
Cancer3DTHEM6
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTHEM6
MedgenTHEM6
Genetic Testing Registry THEM6
NextProtQ8WUY1 [Medical]
GENETestsTHEM6
Target ValidationTHEM6
Huge Navigator THEM6 [HugePedia]
ClinGenTHEM6
Clinical trials, drugs, therapy
MyCancerGenomeTHEM6
Protein Interactions : CTDTHEM6
Pharm GKB GenePA142672318
PharosQ8WUY1
Clinical trialTHEM6
Miscellaneous
canSAR (ICR)THEM6
HarmonizomeTHEM6
DataMed IndexTHEM6
Probes
Litterature
PubMed34 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTHEM6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:35:01 CEST 2021

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