Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

THEMIS2 (thymocyte selection associated family member 2)

Identity

Alias (NCBI)C1orf38
ICB-1
ICB1
HGNC (Hugo) THEMIS2
HGNC Alias symbICB-1
Icb-1
HGNC Alias nameinduced by contact to basement membrane 1
HGNC Previous nameC1orf38
HGNC Previous namechromosome 1 open reading frame 38
LocusID (NCBI) 9473
Atlas_Id 46069
Location 1p35.3  [Link to chromosome band 1p35]
Location_base_pair Starts at 27872543 and ends at 27886685 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)THEMIS2   16839
Cards
Entrez_Gene (NCBI)THEMIS2    thymocyte selection associated family member 2
AliasesC1orf38; ICB-1; ICB1
GeneCards (Weizmann)THEMIS2
Ensembl hg19 (Hinxton)ENSG00000130775 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000130775 [Gene_View]  ENSG00000130775 [Sequence]  chr1:27872543-27886685 [Contig_View]  THEMIS2 [Vega]
ICGC DataPortalENSG00000130775
TCGA cBioPortalTHEMIS2
AceView (NCBI)THEMIS2
Genatlas (Paris)THEMIS2
SOURCE (Princeton)THEMIS2
Genetics Home Reference (NIH)THEMIS2
Genomic and cartography
GoldenPath hg38 (UCSC)THEMIS2  -     chr1:27872543-27886685 +  1p35.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)THEMIS2  -     1p35.3   [Description]    (hg19-Feb_2009)
GoldenPathTHEMIS2 - 1p35.3 [CytoView hg19]  THEMIS2 - 1p35.3 [CytoView hg38]
ImmunoBaseENSG00000130775
Genome Data Viewer NCBITHEMIS2 [Mapview hg19]  
OMIM617856   
Gene and transcription
Genbank (Entrez)AA477142 AB035482 AB050854 AF044896 AF323721
RefSeq transcript (Entrez)NM_001039477 NM_001105556 NM_001286113 NM_001286115 NM_004848
Consensus coding sequences : CCDS (NCBI)THEMIS2
Gene ExpressionTHEMIS2 [ NCBI-GEO ]   THEMIS2 [ EBI - ARRAY_EXPRESS ]   THEMIS2 [ SEEK ]   THEMIS2 [ MEM ]
Gene Expression Viewer (FireBrowse)THEMIS2 [ Firebrowse - Broad ]
GenevisibleExpression of THEMIS2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9473
GTEX Portal (Tissue expression)THEMIS2
Human Protein AtlasENSG00000130775-THEMIS2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)THEMIS2
Human Protein Atlas [tissue]ENSG00000130775-THEMIS2 [tissue]
HPRD12728
Protein Interaction databases
BioGRIDTHEMIS2
STRING (EMBL)THEMIS2
ZODIACTHEMIS2
Ontologies - Pathways
Litterature
PubMed23 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTHEMIS2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:35:01 CEST 2021

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.