| Nomenclature |
|---|
| HGNC (Hugo) | THOC5 19074 |
| Cards |
|---|
| Entrez_Gene (NCBI) | THOC5 8563 THO complex 5 |
| Aliases | C22orf19; Fmip; PK1.3; fSAP79 |
| GeneCards (Weizmann) | THOC5 |
| Ensembl hg19 (Hinxton) | ENSG00000100296 [Gene_View] |
| Ensembl hg38 (Hinxton) | ENSG00000100296 [Gene_View] ENSG00000100296 [Sequence] chr22:29508167-29553747 [Contig_View] THOC5 [Vega] |
| ICGC DataPortal | ENSG00000100296 |
| TCGA cBioPortal | THOC5 |
| AceView (NCBI) | THOC5 |
| Genatlas (Paris) | THOC5 |
| WikiGenes | 8563 |
| SOURCE (Princeton) | THOC5 |
| Genetics Home Reference (NIH) | THOC5 |
| Genomic and cartography |
|---|
| GoldenPath hg38 (UCSC) | THOC5 - chr22:29508167-29553747 - 22q12.2 [Description] (hg38-Dec_2013) |
| GoldenPath hg19 (UCSC) | THOC5 - 22q12.2 [Description] (hg19-Feb_2009) |
| GoldenPath | THOC5 - 22q12.2 [CytoView hg19] THOC5 - 22q12.2 [CytoView hg38] |
| ImmunoBase | ENSG00000100296 |
| Mapping of homologs : NCBI | THOC5 [Mapview hg19] THOC5 [Mapview hg38] |
| OMIM | 612733 |
| Gene and transcription |
|---|
| Genbank (Entrez) | AB023200 AJ006069 AK025385 AK098709 AK122673 |
| RefSeq transcript (Entrez) | NM_001002877 NM_001002878 NM_001002879 NM_003678 |
| RefSeq genomic (Entrez) | |
| Consensus coding sequences : CCDS (NCBI) | THOC5 |
| Cluster EST : Unigene | Hs.75361 [ NCBI ] |
| CGAP (NCI) | Hs.75361 |
| Alternative Splicing Gallery | ENSG00000100296 |
| Gene Expression | THOC5 [ NCBI-GEO ] THOC5 [ EBI - ARRAY_EXPRESS ]
THOC5 [ SEEK ] THOC5 [ MEM ] |
| Gene Expression Viewer (FireBrowse) | THOC5 [ Firebrowse - Broad ] |
| SOURCE (Princeton) | Expression in : [Datasets] [Normal Tissue Atlas] [carcinoma Classsification] [NCI60] |
| Genevestigator | Expression in : [tissues] [cell-lines] [cancer] [perturbations] |
| BioGPS (Tissue expression) | 8563 |
| GTEX Portal (Tissue expression) | THOC5 |
| Human Protein Atlas | ENSG00000100296-THOC5 [pathology] [cell] [tissue] |
| Protein : pattern, domain, 3D structure |
|---|
| UniProt/SwissProt | Q13769 [function] [subcellular_location] [family_and_domains] [pathology_and_biotech] [ptm_processing] [expression] [interaction] |
| NextProt | Q13769 [Sequence] [Exons] [Medical] [Publications] |
| With graphics : InterPro | Q13769 |
| Splice isoforms : SwissVar | Q13769 |
| PhosPhoSitePlus | Q13769 |
| Domains : Interpro (EBI) | THO_Thoc5 |
| Domain families : Pfam (Sanger) | FimP (PF09766) |
| Domain families : Pfam (NCBI) | pfam09766 |
| Conserved Domain (NCBI) | THOC5 |
| DMDM Disease mutations | 8563 |
| Blocks (Seattle) | THOC5 |
| Superfamily | Q13769 |
| Human Protein Atlas [tissue] | ENSG00000100296-THOC5 [tissue] |
| Peptide Atlas | Q13769 |
| HPRD | 16650 |
| IPI | IPI00299417 IPI00893079 IPI00892995 IPI00892999 IPI00892608 IPI00894470 IPI00894067 IPI00894183 IPI01009664 |
| Protein Interaction databases |
|---|
| DIP (DOE-UCLA) | Q13769 |
| IntAct (EBI) | Q13769 |
| FunCoup | ENSG00000100296 |
| BioGRID | THOC5 |
| STRING (EMBL) | THOC5 |
| ZODIAC | THOC5 |
| Ontologies - Pathways |
|---|
| QuickGO | Q13769 |
| Ontology : AmiGO | nuclear chromosome transcription export complex THO complex THO complex part of transcription export complex THO complex part of transcription export complex nuclear chromosome, telomeric region mRNA binding protein binding nucleus nucleoplasm nucleoplasm cytoplasm RNA export from nucleus mRNA export from nucleus mRNA export from nucleus mRNA export from nucleus RNA splicing monocyte differentiation mRNA 3'-end processing positive regulation of DNA-templated transcription, elongation positive regulation of DNA-templated transcription, elongation viral mRNA export from host cell nucleus primitive hemopoiesis negative regulation of DNA damage checkpoint |
| Ontology : EGO-EBI | nuclear chromosome transcription export complex THO complex THO complex part of transcription export complex THO complex part of transcription export complex nuclear chromosome, telomeric region mRNA binding protein binding nucleus nucleoplasm nucleoplasm cytoplasm RNA export from nucleus mRNA export from nucleus mRNA export from nucleus mRNA export from nucleus RNA splicing monocyte differentiation mRNA 3'-end processing positive regulation of DNA-templated transcription, elongation positive regulation of DNA-templated transcription, elongation viral mRNA export from host cell nucleus primitive hemopoiesis negative regulation of DNA damage checkpoint |
| Pathways : KEGG | RNA transport |
| NDEx Network | THOC5 |
| Atlas of Cancer Signalling Network | THOC5 |
| Wikipedia pathways | THOC5 |
| Orthology - Evolution |
|---|
| OrthoDB | 8563 |
| GeneTree (enSembl) | ENSG00000100296 |
| Phylogenetic Trees/Animal Genes : TreeFam | THOC5 |
| HOGENOM | Q13769 |
| Homologs : HomoloGene | THOC5 |
| Homology/Alignments : Family Browser (UCSC) | THOC5 |
| Gene fusions - Rearrangements |
|---|
| Fusion : Mitelman | THOC5/NIPSNAP1 [22q12.2/22q12.2] |
| Fusion Portal | THOC5 22q12.2 NIPSNAP1 22q12.2 OV |
| Fusion : Quiver | THOC5 |
| Polymorphisms : SNP and Copy number variants |
|---|
| NCBI Variation Viewer | THOC5 [hg38] |
| dbSNP Single Nucleotide Polymorphism (NCBI) | THOC5 |
| dbVar | THOC5 |
| ClinVar | THOC5 |
| 1000_Genomes | THOC5 |
| Exome Variant Server | THOC5 |
| ExAC (Exome Aggregation Consortium) | ENSG00000100296 |
| GNOMAD Browser | ENSG00000100296 |
| Varsome Browser | THOC5 |
| Genetic variants : HAPMAP | 8563 |
| Genomic Variants (DGV) | THOC5 [DGVbeta] |
| DECIPHER | THOC5 [patients] [syndromes] [variants] [genes] |
| CONAN: Copy Number Analysis | THOC5 |
| Mutations |
|---|
| ICGC Data Portal | THOC5 |
| TCGA Data Portal | THOC5 |
| Broad Tumor Portal | THOC5 |
| OASIS Portal | THOC5 [ Somatic mutations - Copy number] |
| Somatic Mutations in Cancer : COSMIC | THOC5 [overview] [genome browser] [tissue] [distribution] |
| Somatic Mutations in Cancer : COSMIC3D | THOC5 |
| Mutations and Diseases : HGMD | THOC5 |
| LOVD (Leiden Open Variation Database) | Whole genome datasets |
| LOVD (Leiden Open Variation Database) | LOVD - Leiden Open Variation Database |
| LOVD (Leiden Open Variation Database) | LOVD 3.0 shared installation |
| BioMuta | search THOC5 |
| DgiDB (Drug Gene Interaction Database) | THOC5 |
| DoCM (Curated mutations) | THOC5 (select the gene name) |
| CIViC (Clinical Interpretations of Variants in Cancer) | THOC5 (select a term) |
| intoGen | THOC5 |
| Cancer3D | THOC5(select the gene name) |
| Impact of mutations | [PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser] |
| Diseases |
|---|
| OMIM | 612733 |
| Orphanet | |
| DisGeNET | THOC5 |
| Medgen | THOC5 |
| Genetic Testing Registry | THOC5
|
| NextProt | Q13769 [Medical] |
| TSGene | 8563 |
| GENETests | THOC5 |
| Target Validation | THOC5 |
| Huge Navigator |
THOC5 [HugePedia] |
| snp3D : Map Gene to Disease | 8563 |
| BioCentury BCIQ | THOC5 |
| ClinGen | THOC5 |
| Clinical trials, drugs, therapy |
|---|
| Chemical/Protein Interactions : CTD | 8563 |
| Chemical/Pharm GKB Gene | PA38188 |
| Clinical trial | THOC5 |
| Miscellaneous |
|---|
| canSAR (ICR) | THOC5 (select the gene name) |
| DataMed Index | THOC5 |
| Probes |
|---|
| Litterature |
|---|
| PubMed | 49 Pubmed reference(s) in Entrez |
| GeneRIFs | Gene References Into Functions (Entrez) |
| CoreMine | THOC5 |
| EVEX | THOC5 |
| GoPubMed | THOC5 |
| iHOP | THOC5 |
