Atlas of Genetics and Cytogenetics in Oncology and Haematology


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THUMPD3-AS1 (THUMPD3 antisense RNA 1)

Identity

Alias_namesSETD5-AS1
SETD5 antisense RNA 1
Other alias
HGNC (Hugo) THUMPD3-AS1
LocusID (NCBI) 440944
Atlas_Id 74692
Location 3p25.3  [Link to chromosome band 3p25]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)THUMPD3-AS1   44478
Cards
Entrez_Gene (NCBI)THUMPD3-AS1  440944  THUMPD3 antisense RNA 1
AliasesSETD5-AS1
GeneCards (Weizmann)THUMPD3-AS1
Ensembl hg19 (Hinxton)ENSG00000206573 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000206573 [Gene_View]  - [Contig_View]  THUMPD3-AS1 [Vega]
ICGC DataPortalENSG00000206573
TCGA cBioPortalTHUMPD3-AS1
AceView (NCBI)THUMPD3-AS1
Genatlas (Paris)THUMPD3-AS1
WikiGenes440944
SOURCE (Princeton)THUMPD3-AS1
Genetics Home Reference (NIH)THUMPD3-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)THUMPD3-AS1  -  
GoldenPath hg19 (UCSC)THUMPD3-AS1  -  
EnsemblTHUMPD3-AS1 - [CytoView hg19]  THUMPD3-AS1 - [CytoView hg38]
Mapping of homologs : NCBITHUMPD3-AS1 [Mapview hg19]  THUMPD3-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI168488 AI248388 AK093640 AK128398 AL110136
RefSeq transcript (Entrez)NM_001013713
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)THUMPD3-AS1
Cluster EST : UnigeneHs.730098 [ NCBI ]
CGAP (NCI)Hs.730098
Alternative Splicing GalleryENSG00000206573
Gene ExpressionTHUMPD3-AS1 [ NCBI-GEO ]   THUMPD3-AS1 [ EBI - ARRAY_EXPRESS ]   THUMPD3-AS1 [ SEEK ]   THUMPD3-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)THUMPD3-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)440944
GTEX Portal (Tissue expression)THUMPD3-AS1
Human Protein AtlasENSG00000206573-THUMPD3-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)THUMPD3-AS1
DMDM Disease mutations440944
Blocks (Seattle)THUMPD3-AS1
Human Protein Atlas [tissue]ENSG00000206573-THUMPD3-AS1 [tissue]
IPIIPI00443688   
Protein Interaction databases
FunCoupENSG00000206573
BioGRIDTHUMPD3-AS1
STRING (EMBL)THUMPD3-AS1
ZODIACTHUMPD3-AS1
Ontologies - Pathways
Huge Navigator THUMPD3-AS1 [HugePedia]
snp3D : Map Gene to Disease440944
BioCentury BCIQTHUMPD3-AS1
ClinGenTHUMPD3-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD440944
Clinical trialTHUMPD3-AS1
Miscellaneous
canSAR (ICR)THUMPD3-AS1 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTHUMPD3-AS1
EVEXTHUMPD3-AS1
GoPubMedTHUMPD3-AS1
iHOPTHUMPD3-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 12:32:22 CET 2017

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