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TIAF1 (TGFB1-induced anti-apoptotic factor 1)

Identity

Alias (NCBI)MAJN
SPR210
HGNC (Hugo) TIAF1
LocusID (NCBI) 9220
Atlas_Id 42556
Location 17q11.2  [Link to chromosome band 17q11]
Location_base_pair Starts at 29073521 and ends at 29075609 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
FOXK2 (17q25.3) / TIAF1 (17q11.2)TIAF1 (17q11.2) / FGFR1 (8p11.23)TIAF1 (17q11.2) / LRRC37B (17q11.2)
FOXK2 17q25.3 / TIAF1 17q11.2TIAF1 17q11.2 / LRRC37B 17q11.2

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TIAF1   11803
Cards
Entrez_Gene (NCBI)TIAF1    TGFB1-induced anti-apoptotic factor 1
AliasesMAJN; SPR210
GeneCards (Weizmann)TIAF1
Ensembl hg19 (Hinxton)ENSG00000221995 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000221995 [Gene_View]  ENSG00000221995 [Sequence]  chr17:29073521-29075609 [Contig_View]  TIAF1 [Vega]
ICGC DataPortalENSG00000221995
TCGA cBioPortalTIAF1
AceView (NCBI)TIAF1
Genatlas (Paris)TIAF1
SOURCE (Princeton)TIAF1
Genetics Home Reference (NIH)TIAF1
Genomic and cartography
GoldenPath hg38 (UCSC)TIAF1  -     chr17:29073521-29075609 -  17q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TIAF1  -     17q11.2   [Description]    (hg19-Feb_2009)
GoldenPathTIAF1 - 17q11.2 [CytoView hg19]  TIAF1 - 17q11.2 [CytoView hg38]
ImmunoBaseENSG00000221995
Genome Data Viewer NCBITIAF1 [Mapview hg19]  
OMIM609517   
Gene and transcription
Genbank (Entrez)AF105277 AK054958 AK126861 BC047669 BC058075
RefSeq transcript (Entrez)NM_004740
Consensus coding sequences : CCDS (NCBI)TIAF1
Gene ExpressionTIAF1 [ NCBI-GEO ]   TIAF1 [ EBI - ARRAY_EXPRESS ]   TIAF1 [ SEEK ]   TIAF1 [ MEM ]
Gene Expression Viewer (FireBrowse)TIAF1 [ Firebrowse - Broad ]
GenevisibleExpression of TIAF1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9220
GTEX Portal (Tissue expression)TIAF1
Human Protein AtlasENSG00000221995-TIAF1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO95411   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO95411  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO95411
PhosPhoSitePlusO95411
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TIAF1
SuperfamilyO95411
AlphaFold pdb e-kbO95411   
Human Protein Atlas [tissue]ENSG00000221995-TIAF1 [tissue]
HPRD10268
Protein Interaction databases
DIP (DOE-UCLA)O95411
IntAct (EBI)O95411
BioGRIDTIAF1
STRING (EMBL)TIAF1
ZODIACTIAF1
Ontologies - Pathways
QuickGOO95411
Ontology : AmiGOmolecular_function  protein binding  nucleus  apoptotic process  I-kappaB kinase/NF-kappaB signaling  negative regulation of apoptotic process  
Ontology : EGO-EBImolecular_function  protein binding  nucleus  apoptotic process  I-kappaB kinase/NF-kappaB signaling  negative regulation of apoptotic process  
NDEx NetworkTIAF1
Atlas of Cancer Signalling NetworkTIAF1
Wikipedia pathwaysTIAF1
Orthology - Evolution
OrthoDB9220
GeneTree (enSembl)ENSG00000221995
Phylogenetic Trees/Animal Genes : TreeFamTIAF1
Homologs : HomoloGeneTIAF1
Homology/Alignments : Family Browser (UCSC)TIAF1
Gene fusions - Rearrangements
Fusion : MitelmanFOXK2/TIAF1 [17q25.3/17q11.2]  
Fusion : MitelmanTIAF1/LRRC37B [17q11.2/17q11.2]  
Fusion : QuiverTIAF1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTIAF1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TIAF1
dbVarTIAF1
ClinVarTIAF1
MonarchTIAF1
1000_GenomesTIAF1 
Exome Variant ServerTIAF1
GNOMAD BrowserENSG00000221995
Varsome BrowserTIAF1
ACMGTIAF1 variants
VarityO95411
Genomic Variants (DGV)TIAF1 [DGVbeta]
DECIPHERTIAF1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTIAF1 
Mutations
ICGC Data PortalTIAF1 
TCGA Data PortalTIAF1 
Broad Tumor PortalTIAF1
OASIS PortalTIAF1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTIAF1  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTIAF1
Mutations and Diseases : HGMDTIAF1
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTIAF1
DgiDB (Drug Gene Interaction Database)TIAF1
DoCM (Curated mutations)TIAF1
CIViC (Clinical Interpretations of Variants in Cancer)TIAF1
Cancer3DTIAF1
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609517   
Orphanet
DisGeNETTIAF1
MedgenTIAF1
Genetic Testing Registry TIAF1
NextProtO95411 [Medical]
GENETestsTIAF1
Target ValidationTIAF1
Huge Navigator TIAF1 [HugePedia]
ClinGenTIAF1
Clinical trials, drugs, therapy
MyCancerGenomeTIAF1
Protein Interactions : CTDTIAF1
Pharm GKB GenePA36512
PharosO95411
Clinical trialTIAF1
Miscellaneous
canSAR (ICR)TIAF1
HarmonizomeTIAF1
DataMed IndexTIAF1
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTIAF1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:35:04 CEST 2021

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