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TIMM10B (translocase of inner mitochondrial membrane 10B)

Identity

Alias_namesFXC1
fracture callus 1 (rat) homolog
fracture callus 1 homolog (rat)
translocase of inner mitochondrial membrane 10 homolog B (yeast)
Alias_symbol (synonym)Tim9b
TIM10B
Other alias
HGNC (Hugo) TIMM10B
LocusID (NCBI) 26515
Atlas_Id 40650
Location 11p15.4  [Link to chromosome band 11p15]
Location_base_pair Starts at 6481447 and ends at 6484681 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TIMM10B   4022
Cards
Entrez_Gene (NCBI)TIMM10B  26515  translocase of inner mitochondrial membrane 10B
AliasesFXC1; TIM10B; Tim9b
GeneCards (Weizmann)TIMM10B
Ensembl hg19 (Hinxton)ENSG00000132286 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000132286 [Gene_View]  chr11:6481447-6484681 [Contig_View]  TIMM10B [Vega]
ICGC DataPortalENSG00000132286
TCGA cBioPortalTIMM10B
AceView (NCBI)TIMM10B
Genatlas (Paris)TIMM10B
WikiGenes26515
SOURCE (Princeton)TIMM10B
Genetics Home Reference (NIH)TIMM10B
Genomic and cartography
GoldenPath hg38 (UCSC)TIMM10B  -     chr11:6481447-6484681 +  11p15.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TIMM10B  -     11p15.4   [Description]    (hg19-Feb_2009)
EnsemblTIMM10B - 11p15.4 [CytoView hg19]  TIMM10B - 11p15.4 [CytoView hg38]
Mapping of homologs : NCBITIMM10B [Mapview hg19]  TIMM10B [Mapview hg38]
OMIM607388   
Gene and transcription
Genbank (Entrez)AF150105 AF152355 AF183415 AI052126 AK002130
RefSeq transcript (Entrez)NM_012192
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TIMM10B
Cluster EST : UnigeneHs.54943 [ NCBI ]
CGAP (NCI)Hs.54943
Alternative Splicing GalleryENSG00000132286
Gene ExpressionTIMM10B [ NCBI-GEO ]   TIMM10B [ EBI - ARRAY_EXPRESS ]   TIMM10B [ SEEK ]   TIMM10B [ MEM ]
Gene Expression Viewer (FireBrowse)TIMM10B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)26515
GTEX Portal (Tissue expression)TIMM10B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y5J6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9Y5J6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9Y5J6
Splice isoforms : SwissVarQ9Y5J6
PhosPhoSitePlusQ9Y5J6
Domains : Interpro (EBI)Tim10/DDP_fam_Znf   
Domain families : Pfam (Sanger)zf-Tim10_DDP (PF02953)   
Domain families : Pfam (NCBI)pfam02953   
Conserved Domain (NCBI)TIMM10B
DMDM Disease mutations26515
Blocks (Seattle)TIMM10B
SuperfamilyQ9Y5J6
Human Protein AtlasENSG00000132286
Peptide AtlasQ9Y5J6
HPRD16242
IPIIPI00001538   IPI00946452   
Protein Interaction databases
DIP (DOE-UCLA)Q9Y5J6
IntAct (EBI)Q9Y5J6
FunCoupENSG00000132286
BioGRIDTIMM10B
STRING (EMBL)TIMM10B
ZODIACTIMM10B
Ontologies - Pathways
QuickGOQ9Y5J6
Ontology : AmiGOprotein binding  mitochondrial inner membrane  mitochondrial inner membrane  mitochondrial intermembrane space  protein targeting to mitochondrion  cell-matrix adhesion  mitochondrial intermembrane space protein transporter complex  metal ion binding  
Ontology : EGO-EBIprotein binding  mitochondrial inner membrane  mitochondrial inner membrane  mitochondrial intermembrane space  protein targeting to mitochondrion  cell-matrix adhesion  mitochondrial intermembrane space protein transporter complex  metal ion binding  
NDEx NetworkTIMM10B
Atlas of Cancer Signalling NetworkTIMM10B
Wikipedia pathwaysTIMM10B
Orthology - Evolution
OrthoDB26515
GeneTree (enSembl)ENSG00000132286
Phylogenetic Trees/Animal Genes : TreeFamTIMM10B
HOVERGENQ9Y5J6
HOGENOMQ9Y5J6
Homologs : HomoloGeneTIMM10B
Homology/Alignments : Family Browser (UCSC)TIMM10B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTIMM10B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TIMM10B
dbVarTIMM10B
ClinVarTIMM10B
1000_GenomesTIMM10B 
Exome Variant ServerTIMM10B
ExAC (Exome Aggregation Consortium)TIMM10B (select the gene name)
Genetic variants : HAPMAP26515
Genomic Variants (DGV)TIMM10B [DGVbeta]
DECIPHERTIMM10B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTIMM10B 
Mutations
ICGC Data PortalTIMM10B 
TCGA Data PortalTIMM10B 
Broad Tumor PortalTIMM10B
OASIS PortalTIMM10B [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDTIMM10B
BioMutasearch TIMM10B
DgiDB (Drug Gene Interaction Database)TIMM10B
DoCM (Curated mutations)TIMM10B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TIMM10B (select a term)
intoGenTIMM10B
Cancer3DTIMM10B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607388   
Orphanet
MedgenTIMM10B
Genetic Testing Registry TIMM10B
NextProtQ9Y5J6 [Medical]
TSGene26515
GENETestsTIMM10B
Target ValidationTIMM10B
Huge Navigator TIMM10B [HugePedia]
snp3D : Map Gene to Disease26515
BioCentury BCIQTIMM10B
ClinGenTIMM10B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26515
Chemical/Pharm GKB GenePA28438
Clinical trialTIMM10B
Miscellaneous
canSAR (ICR)TIMM10B (select the gene name)
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTIMM10B
EVEXTIMM10B
GoPubMedTIMM10B
iHOPTIMM10B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:59:23 CEST 2017

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