Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

TIMM13 (translocase of inner mitochondrial membrane 13)

Identity

Alias (NCBI)TIM13
TIM13B
TIMM13A
TIMM13B
ppv1
HGNC (Hugo) TIMM13
HGNC Alias symbTim13
HGNC Previous nameTIMM13B
HGNC Previous nametranslocase of inner mitochondrial membrane 13 (yeast) homolog B
 translocase of inner mitochondrial membrane 13 homolog (yeast)
LocusID (NCBI) 26517
Atlas_Id 42563
Location 19p13.3  [Link to chromosome band 19p13]
Location_base_pair Starts at 2425625 and ends at 2427586 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
TIMM13 (19p13.3) / BAIAP2 (17q25.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TIMM13   11816
Cards
Entrez_Gene (NCBI)TIMM13    translocase of inner mitochondrial membrane 13
AliasesTIM13; TIM13B; TIMM13A; TIMM13B; 
ppv1
GeneCards (Weizmann)TIMM13
Ensembl hg19 (Hinxton)ENSG00000099800 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000099800 [Gene_View]  ENSG00000099800 [Sequence]  chr19:2425625-2427586 [Contig_View]  TIMM13 [Vega]
ICGC DataPortalENSG00000099800
TCGA cBioPortalTIMM13
AceView (NCBI)TIMM13
Genatlas (Paris)TIMM13
SOURCE (Princeton)TIMM13
Genetics Home Reference (NIH)TIMM13
Genomic and cartography
GoldenPath hg38 (UCSC)TIMM13  -     chr19:2425625-2427586 -  19p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TIMM13  -     19p13.3   [Description]    (hg19-Feb_2009)
GoldenPathTIMM13 - 19p13.3 [CytoView hg19]  TIMM13 - 19p13.3 [CytoView hg38]
ImmunoBaseENSG00000099800
Genome Data Viewer NCBITIMM13 [Mapview hg19]  
OMIM607383   
Gene and transcription
Genbank (Entrez)AF144700 AF152352 AK024764 AL520160 BC008607
RefSeq transcript (Entrez)NM_012458
Consensus coding sequences : CCDS (NCBI)TIMM13
Gene ExpressionTIMM13 [ NCBI-GEO ]   TIMM13 [ EBI - ARRAY_EXPRESS ]   TIMM13 [ SEEK ]   TIMM13 [ MEM ]
Gene Expression Viewer (FireBrowse)TIMM13 [ Firebrowse - Broad ]
GenevisibleExpression of TIMM13 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)26517
GTEX Portal (Tissue expression)TIMM13
Human Protein AtlasENSG00000099800-TIMM13 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y5L4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9Y5L4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9Y5L4
PhosPhoSitePlusQ9Y5L4
Domains : Interpro (EBI)Tim10-like    Tim10-like_dom_sf    Tim8/13   
Domain families : Pfam (Sanger)zf-Tim10_DDP (PF02953)   
Domain families : Pfam (NCBI)pfam02953   
Conserved Domain (NCBI)TIMM13
SuperfamilyQ9Y5L4
AlphaFold pdb e-kbQ9Y5L4   
Human Protein Atlas [tissue]ENSG00000099800-TIMM13 [tissue]
HPRD09573
Protein Interaction databases
DIP (DOE-UCLA)Q9Y5L4
IntAct (EBI)Q9Y5L4
BioGRIDTIMM13
STRING (EMBL)TIMM13
ZODIACTIMM13
Ontologies - Pathways
QuickGOQ9Y5L4
Ontology : AmiGOfibrillar center  protein binding  mitochondrion  mitochondrial inner membrane  protein targeting to mitochondrion  sensory perception of sound  zinc ion binding  mitochondrial intermembrane space protein transporter complex  mitochondrial intermembrane space protein transporter complex  protein insertion into mitochondrial inner membrane  protein insertion into mitochondrial inner membrane  
Ontology : EGO-EBIfibrillar center  protein binding  mitochondrion  mitochondrial inner membrane  protein targeting to mitochondrion  sensory perception of sound  zinc ion binding  mitochondrial intermembrane space protein transporter complex  mitochondrial intermembrane space protein transporter complex  protein insertion into mitochondrial inner membrane  protein insertion into mitochondrial inner membrane  
NDEx NetworkTIMM13
Atlas of Cancer Signalling NetworkTIMM13
Wikipedia pathwaysTIMM13
Orthology - Evolution
OrthoDB26517
GeneTree (enSembl)ENSG00000099800
Phylogenetic Trees/Animal Genes : TreeFamTIMM13
Homologs : HomoloGeneTIMM13
Homology/Alignments : Family Browser (UCSC)TIMM13
Gene fusions - Rearrangements
Fusion : QuiverTIMM13
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTIMM13 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TIMM13
dbVarTIMM13
ClinVarTIMM13
MonarchTIMM13
1000_GenomesTIMM13 
Exome Variant ServerTIMM13
GNOMAD BrowserENSG00000099800
Varsome BrowserTIMM13
ACMGTIMM13 variants
VarityQ9Y5L4
Genomic Variants (DGV)TIMM13 [DGVbeta]
DECIPHERTIMM13 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTIMM13 
Mutations
ICGC Data PortalTIMM13 
TCGA Data PortalTIMM13 
Broad Tumor PortalTIMM13
OASIS PortalTIMM13 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTIMM13  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTIMM13
Mutations and Diseases : HGMDTIMM13
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTIMM13
DgiDB (Drug Gene Interaction Database)TIMM13
DoCM (Curated mutations)TIMM13
CIViC (Clinical Interpretations of Variants in Cancer)TIMM13
Cancer3DTIMM13
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607383   
Orphanet
DisGeNETTIMM13
MedgenTIMM13
Genetic Testing Registry TIMM13
NextProtQ9Y5L4 [Medical]
GENETestsTIMM13
Target ValidationTIMM13
Huge Navigator TIMM13 [HugePedia]
ClinGenTIMM13
Clinical trials, drugs, therapy
MyCancerGenomeTIMM13
Protein Interactions : CTDTIMM13
Pharm GKB GenePA36522
PharosQ9Y5L4
Clinical trialTIMM13
Miscellaneous
canSAR (ICR)TIMM13
HarmonizomeTIMM13
DataMed IndexTIMM13
Probes
Litterature
PubMed64 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTIMM13
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:35:06 CEST 2021

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.