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TIMM17A (translocase of inner mitochondrial membrane 17A)

Identity

Alias (NCBI)TIM17
TIM17A
HGNC (Hugo) TIMM17A
HGNC Alias symbTIM17
TIM17A
HGNC Previous nametranslocase of inner mitochondrial membrane 17 homolog A (yeast)
LocusID (NCBI) 10440
Atlas_Id 42564
Location 1q32.1  [Link to chromosome band 1q32]
Location_base_pair Starts at 201955503 and ends at 201970664 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
NUF2 (1q23.3) / TIMM17A (1q32.1)TIMM17A (1q32.1) / RASSF5 (1q32.1)TIMM17A (1q32.1) / RTN4 (2p16.1)
NUF2 1q23.3 / TIMM17A 1q32.1TIMM17A 1q32.1 / RASSF5 1q32.1

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TIMM17A   17315
Cards
Entrez_Gene (NCBI)TIMM17A    translocase of inner mitochondrial membrane 17A
AliasesTIM17; TIM17A
GeneCards (Weizmann)TIMM17A
Ensembl hg19 (Hinxton)ENSG00000134375 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000134375 [Gene_View]  ENSG00000134375 [Sequence]  chr1:201955503-201970664 [Contig_View]  TIMM17A [Vega]
ICGC DataPortalENSG00000134375
TCGA cBioPortalTIMM17A
AceView (NCBI)TIMM17A
Genatlas (Paris)TIMM17A
SOURCE (Princeton)TIMM17A
Genetics Home Reference (NIH)TIMM17A
Genomic and cartography
GoldenPath hg38 (UCSC)TIMM17A  -     chr1:201955503-201970664 +  1q32.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TIMM17A  -     1q32.1   [Description]    (hg19-Feb_2009)
GoldenPathTIMM17A - 1q32.1 [CytoView hg19]  TIMM17A - 1q32.1 [CytoView hg38]
ImmunoBaseENSG00000134375
Genome Data Viewer NCBITIMM17A [Mapview hg19]  
OMIM605057   
Gene and transcription
Genbank (Entrez)AF106622 AK023063 AK315602 AU123184 BC004439
RefSeq transcript (Entrez)NM_006335
Consensus coding sequences : CCDS (NCBI)TIMM17A
Gene ExpressionTIMM17A [ NCBI-GEO ]   TIMM17A [ EBI - ARRAY_EXPRESS ]   TIMM17A [ SEEK ]   TIMM17A [ MEM ]
Gene Expression Viewer (FireBrowse)TIMM17A [ Firebrowse - Broad ]
GenevisibleExpression of TIMM17A in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10440
GTEX Portal (Tissue expression)TIMM17A
Human Protein AtlasENSG00000134375-TIMM17A [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ99595   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ99595  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ99595
PhosPhoSitePlusQ99595
Domains : Interpro (EBI)Tim17   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TIMM17A
SuperfamilyQ99595
AlphaFold pdb e-kbQ99595   
Human Protein Atlas [tissue]ENSG00000134375-TIMM17A [tissue]
HPRD05449
Protein Interaction databases
DIP (DOE-UCLA)Q99595
IntAct (EBI)Q99595
BioGRIDTIMM17A
STRING (EMBL)TIMM17A
ZODIACTIMM17A
Ontologies - Pathways
QuickGOQ99595
Ontology : AmiGOnucleoplasm  mitochondrion  mitochondrial inner membrane  TIM23 mitochondrial import inner membrane translocase complex  TIM23 mitochondrial import inner membrane translocase complex  protein targeting to mitochondrion  protein transmembrane transporter activity  positive regulation of protein processing  protein import into mitochondrial matrix  integral component of mitochondrial inner membrane  integral component of mitochondrial inner membrane  
Ontology : EGO-EBInucleoplasm  mitochondrion  mitochondrial inner membrane  TIM23 mitochondrial import inner membrane translocase complex  TIM23 mitochondrial import inner membrane translocase complex  protein targeting to mitochondrion  protein transmembrane transporter activity  positive regulation of protein processing  protein import into mitochondrial matrix  integral component of mitochondrial inner membrane  integral component of mitochondrial inner membrane  
NDEx NetworkTIMM17A
Atlas of Cancer Signalling NetworkTIMM17A
Wikipedia pathwaysTIMM17A
Orthology - Evolution
OrthoDB10440
GeneTree (enSembl)ENSG00000134375
Phylogenetic Trees/Animal Genes : TreeFamTIMM17A
Homologs : HomoloGeneTIMM17A
Homology/Alignments : Family Browser (UCSC)TIMM17A
Gene fusions - Rearrangements
Fusion : MitelmanNUF2/TIMM17A [1q23.3/1q32.1]  
Fusion : MitelmanTIMM17A/RASSF5 [1q32.1/1q32.1]  
Fusion : QuiverTIMM17A
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTIMM17A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TIMM17A
dbVarTIMM17A
ClinVarTIMM17A
MonarchTIMM17A
1000_GenomesTIMM17A 
Exome Variant ServerTIMM17A
GNOMAD BrowserENSG00000134375
Varsome BrowserTIMM17A
ACMGTIMM17A variants
VarityQ99595
Genomic Variants (DGV)TIMM17A [DGVbeta]
DECIPHERTIMM17A [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTIMM17A 
Mutations
ICGC Data PortalTIMM17A 
TCGA Data PortalTIMM17A 
Broad Tumor PortalTIMM17A
OASIS PortalTIMM17A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTIMM17A  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTIMM17A
Mutations and Diseases : HGMDTIMM17A
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTIMM17A
DgiDB (Drug Gene Interaction Database)TIMM17A
DoCM (Curated mutations)TIMM17A
CIViC (Clinical Interpretations of Variants in Cancer)TIMM17A
Cancer3DTIMM17A
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605057   
Orphanet
DisGeNETTIMM17A
MedgenTIMM17A
Genetic Testing Registry TIMM17A
NextProtQ99595 [Medical]
GENETestsTIMM17A
Target ValidationTIMM17A
Huge Navigator TIMM17A [HugePedia]
ClinGenTIMM17A
Clinical trials, drugs, therapy
MyCancerGenomeTIMM17A
Protein Interactions : CTDTIMM17A
Pharm GKB GenePA38228
PharosQ99595
Clinical trialTIMM17A
Miscellaneous
canSAR (ICR)TIMM17A
HarmonizomeTIMM17A
DataMed IndexTIMM17A
Probes
Litterature
PubMed28 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTIMM17A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:35:07 CEST 2021

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