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TIMM22 (translocase of inner mitochondrial membrane 22 homolog (yeast))

Identity

Alias_namesTEX4
testis-expressed sequence 4
translocase of inner mitochondrial membrane 22 homolog (yeast)
Alias_symbol (synonym)TIM22
Other alias
HGNC (Hugo) TIMM22
LocusID (NCBI) 29928
Atlas_Id 74705
Location 17p13.3  [Link to chromosome band 17p13]
Location_base_pair Starts at 900357 and ends at 905390 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TIMM22   17317
Cards
Entrez_Gene (NCBI)TIMM22  29928  translocase of inner mitochondrial membrane 22 homolog (yeast)
AliasesTEX4; TIM22
GeneCards (Weizmann)TIMM22
Ensembl hg19 (Hinxton) [Gene_View]  chr17:900357-905390 [Contig_View]  TIMM22 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr17:900357-905390 [Contig_View]  TIMM22 [Vega]
TCGA cBioPortalTIMM22
AceView (NCBI)TIMM22
Genatlas (Paris)TIMM22
WikiGenes29928
SOURCE (Princeton)TIMM22
Genetics Home Reference (NIH)TIMM22
Genomic and cartography
GoldenPath hg19 (UCSC)TIMM22  -     chr17:900357-905390 +  17p13.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)TIMM22  -     17p13.3   [Description]    (hg38-Dec_2013)
EnsemblTIMM22 - 17p13.3 [CytoView hg19]  TIMM22 - 17p13.3 [CytoView hg38]
Mapping of homologs : NCBITIMM22 [Mapview hg19]  TIMM22 [Mapview hg38]
OMIM607251   
Gene and transcription
Genbank (Entrez)AF155330 AK000830 AK225453 BC002324
RefSeq transcript (Entrez)NM_013337
RefSeq genomic (Entrez)NC_000017 NC_018928 NT_010718 NT_187613 NT_187664 NW_004929405
Consensus coding sequences : CCDS (NCBI)TIMM22
Cluster EST : UnigeneHs.745034 [ NCBI ]
CGAP (NCI)Hs.745034
Gene ExpressionTIMM22 [ NCBI-GEO ]   TIMM22 [ EBI - ARRAY_EXPRESS ]   TIMM22 [ SEEK ]   TIMM22 [ MEM ]
Gene Expression Viewer (FireBrowse)TIMM22 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)29928
GTEX Portal (Tissue expression)TIMM22
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y584   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9Y584  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9Y584
Splice isoforms : SwissVarQ9Y584
PhosPhoSitePlusQ9Y584
Domains : Interpro (EBI)Tim17/Tim22/Tim23/PMP24   
Domain families : Pfam (Sanger)Tim17 (PF02466)   
Domain families : Pfam (NCBI)pfam02466   
Conserved Domain (NCBI)TIMM22
DMDM Disease mutations29928
Blocks (Seattle)TIMM22
SuperfamilyQ9Y584
Peptide AtlasQ9Y584
HPRD06262
IPIIPI00001141   
Protein Interaction databases
DIP (DOE-UCLA)Q9Y584
IntAct (EBI)Q9Y584
BioGRIDTIMM22
STRING (EMBL)TIMM22
ZODIACTIMM22
Ontologies - Pathways
QuickGOQ9Y584
Ontology : AmiGOmitochondrial inner membrane  protein targeting to mitochondrion  protein channel activity  integral component of membrane  cellular protein metabolic process  protein import into mitochondrial inner membrane  
Ontology : EGO-EBImitochondrial inner membrane  protein targeting to mitochondrion  protein channel activity  integral component of membrane  cellular protein metabolic process  protein import into mitochondrial inner membrane  
NDEx NetworkTIMM22
Atlas of Cancer Signalling NetworkTIMM22
Wikipedia pathwaysTIMM22
Orthology - Evolution
OrthoDB29928
Phylogenetic Trees/Animal Genes : TreeFamTIMM22
HOVERGENQ9Y584
HOGENOMQ9Y584
Homologs : HomoloGeneTIMM22
Homology/Alignments : Family Browser (UCSC)TIMM22
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTIMM22 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TIMM22
dbVarTIMM22
ClinVarTIMM22
1000_GenomesTIMM22 
Exome Variant ServerTIMM22
ExAC (Exome Aggregation Consortium)TIMM22 (select the gene name)
Genetic variants : HAPMAP29928
Genomic Variants (DGV)TIMM22 [DGVbeta]
DECIPHER (Syndromes)17:900357-905390  
CONAN: Copy Number AnalysisTIMM22 
Mutations
ICGC Data PortalTIMM22 
TCGA Data PortalTIMM22 
Broad Tumor PortalTIMM22
OASIS PortalTIMM22 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTIMM22  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTIMM22
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch TIMM22
DgiDB (Drug Gene Interaction Database)TIMM22
DoCM (Curated mutations)TIMM22 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TIMM22 (select a term)
intoGenTIMM22
Cancer3DTIMM22(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607251   
Orphanet
MedgenTIMM22
Genetic Testing Registry TIMM22
NextProtQ9Y584 [Medical]
TSGene29928
GENETestsTIMM22
Huge Navigator TIMM22 [HugePedia]
snp3D : Map Gene to Disease29928
BioCentury BCIQTIMM22
ClinGenTIMM22
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD29928
Chemical/Pharm GKB GenePA38230
Clinical trialTIMM22
Miscellaneous
canSAR (ICR)TIMM22 (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTIMM22
EVEXTIMM22
GoPubMedTIMM22
iHOPTIMM22
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:48:09 CET 2017

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