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TIMM23 (translocase of inner mitochondrial membrane 23)

Identity

Alias_namestranslocase of inner mitochondrial membrane 23 homolog (yeast)
Alias_symbol (synonym)TIM23
Other alias
HGNC (Hugo) TIMM23
LocusID (NCBI) 100287932
Atlas_Id 42566
Location 10q11.22  [Link to chromosome band 10q11]
Location_base_pair Starts at 45972453 and ends at 46003741 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
TIMM23 (10q11.23) / LINC00843 ()

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TIMM23   17312
Cards
Entrez_Gene (NCBI)TIMM23  100287932  translocase of inner mitochondrial membrane 23
AliasesTIM23
GeneCards (Weizmann)TIMM23
Ensembl hg19 (Hinxton)ENSG00000265354 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000265354 [Gene_View]  chr10:45972453-46003741 [Contig_View]  TIMM23 [Vega]
ICGC DataPortalENSG00000265354
TCGA cBioPortalTIMM23
AceView (NCBI)TIMM23
Genatlas (Paris)TIMM23
WikiGenes100287932
SOURCE (Princeton)TIMM23
Genetics Home Reference (NIH)TIMM23
Genomic and cartography
GoldenPath hg38 (UCSC)TIMM23  -     chr10:45972453-46003741 +  10q11.22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TIMM23  -     10q11.22   [Description]    (hg19-Feb_2009)
EnsemblTIMM23 - 10q11.22 [CytoView hg19]  TIMM23 - 10q11.22 [CytoView hg38]
Mapping of homologs : NCBITIMM23 [Mapview hg19]  TIMM23 [Mapview hg38]
OMIM605034   
Gene and transcription
Genbank (Entrez)AF030162 AF116628 AK223331 AK304883 AY442341
RefSeq transcript (Entrez)NM_006327
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TIMM23
Cluster EST : UnigeneHs.661964 [ NCBI ]
CGAP (NCI)Hs.661964
Alternative Splicing GalleryENSG00000265354
Gene ExpressionTIMM23 [ NCBI-GEO ]   TIMM23 [ EBI - ARRAY_EXPRESS ]   TIMM23 [ SEEK ]   TIMM23 [ MEM ]
Gene Expression Viewer (FireBrowse)TIMM23 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100287932
GTEX Portal (Tissue expression)TIMM23
Protein : pattern, domain, 3D structure
UniProt/SwissProtO14925   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO14925  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO14925
Splice isoforms : SwissVarO14925
PhosPhoSitePlusO14925
Domains : Interpro (EBI)Tim17/Tim22/Tim23/PMP24    Tim23   
Domain families : Pfam (Sanger)Tim17 (PF02466)   
Domain families : Pfam (NCBI)pfam02466   
Conserved Domain (NCBI)TIMM23
DMDM Disease mutations100287932
Blocks (Seattle)TIMM23
SuperfamilyO14925
Human Protein AtlasENSG00000265354
Peptide AtlasO14925
IPIIPI00007309   IPI00908999   IPI00953449   IPI00514206   IPI00016228   IPI00514314   IPI01018662   
Protein Interaction databases
DIP (DOE-UCLA)O14925
IntAct (EBI)O14925
FunCoupENSG00000265354
BioGRIDTIMM23
STRING (EMBL)TIMM23
ZODIACTIMM23
Ontologies - Pathways
QuickGOO14925
Ontology : AmiGOprotein binding  mitochondrion  mitochondrial inner membrane  mitochondrial inner membrane  mitochondrial inner membrane presequence translocase complex  mitochondrial intermembrane space  protein targeting to mitochondrion  protein channel activity  P-P-bond-hydrolysis-driven protein transmembrane transporter activity  protein import into mitochondrial matrix  integral component of mitochondrial inner membrane  
Ontology : EGO-EBIprotein binding  mitochondrion  mitochondrial inner membrane  mitochondrial inner membrane  mitochondrial inner membrane presequence translocase complex  mitochondrial intermembrane space  protein targeting to mitochondrion  protein channel activity  P-P-bond-hydrolysis-driven protein transmembrane transporter activity  protein import into mitochondrial matrix  integral component of mitochondrial inner membrane  
NDEx NetworkTIMM23
Atlas of Cancer Signalling NetworkTIMM23
Wikipedia pathwaysTIMM23
Orthology - Evolution
OrthoDB100287932
GeneTree (enSembl)ENSG00000265354
Phylogenetic Trees/Animal Genes : TreeFamTIMM23
HOVERGENO14925
HOGENOMO14925
Homologs : HomoloGeneTIMM23
Homology/Alignments : Family Browser (UCSC)TIMM23
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTIMM23 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TIMM23
dbVarTIMM23
ClinVarTIMM23
1000_GenomesTIMM23 
Exome Variant ServerTIMM23
ExAC (Exome Aggregation Consortium)TIMM23 (select the gene name)
Genetic variants : HAPMAP100287932
Genomic Variants (DGV)TIMM23 [DGVbeta]
DECIPHERTIMM23 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTIMM23 
Mutations
ICGC Data PortalTIMM23 
TCGA Data PortalTIMM23 
Broad Tumor PortalTIMM23
OASIS PortalTIMM23 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDTIMM23
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)Mendelian genes
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch TIMM23
DgiDB (Drug Gene Interaction Database)TIMM23
DoCM (Curated mutations)TIMM23 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TIMM23 (select a term)
intoGenTIMM23
Cancer3DTIMM23(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605034   
Orphanet
MedgenTIMM23
Genetic Testing Registry TIMM23
NextProtO14925 [Medical]
TSGene100287932
GENETestsTIMM23
Target ValidationTIMM23
Huge Navigator TIMM23 [HugePedia]
snp3D : Map Gene to Disease100287932
BioCentury BCIQTIMM23
ClinGenTIMM23
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100287932
Chemical/Pharm GKB GenePA38227
Clinical trialTIMM23
Miscellaneous
canSAR (ICR)TIMM23 (select the gene name)
Probes
Litterature
PubMed31 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTIMM23
EVEXTIMM23
GoPubMedTIMM23
iHOPTIMM23
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Aug 1 17:16:55 CEST 2017

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