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TIMM44 (translocase of inner mitochondrial membrane 44)

Identity

Alias_namestranslocase of inner mitochondrial membrane 44 homolog (yeast)
Alias_symbol (synonym)TIM44
Other alias
HGNC (Hugo) TIMM44
LocusID (NCBI) 10469
Atlas_Id 42567
Location 19p13.2  [Link to chromosome band 19p13]
Location_base_pair Starts at 7991603 and ends at 8008708 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TIMM44   17316
Cards
Entrez_Gene (NCBI)TIMM44  10469  translocase of inner mitochondrial membrane 44
AliasesTIM44
GeneCards (Weizmann)TIMM44
Ensembl hg19 (Hinxton)ENSG00000104980 [Gene_View]  chr19:7991603-8008708 [Contig_View]  TIMM44 [Vega]
Ensembl hg38 (Hinxton)ENSG00000104980 [Gene_View]  chr19:7991603-8008708 [Contig_View]  TIMM44 [Vega]
ICGC DataPortalENSG00000104980
TCGA cBioPortalTIMM44
AceView (NCBI)TIMM44
Genatlas (Paris)TIMM44
WikiGenes10469
SOURCE (Princeton)TIMM44
Genetics Home Reference (NIH)TIMM44
Genomic and cartography
GoldenPath hg19 (UCSC)TIMM44  -     chr19:7991603-8008708 -  19p13.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)TIMM44  -     19p13.2   [Description]    (hg38-Dec_2013)
EnsemblTIMM44 - 19p13.2 [CytoView hg19]  TIMM44 - 19p13.2 [CytoView hg38]
Mapping of homologs : NCBITIMM44 [Mapview hg19]  TIMM44 [Mapview hg38]
OMIM605058   
Gene and transcription
Genbank (Entrez)AF026030 AF041254 AK223062 AK289634 AK309415
RefSeq transcript (Entrez)NM_006351
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011295 NW_004929413
Consensus coding sequences : CCDS (NCBI)TIMM44
Cluster EST : UnigeneHs.465784 [ NCBI ]
CGAP (NCI)Hs.465784
Alternative Splicing GalleryENSG00000104980
Gene ExpressionTIMM44 [ NCBI-GEO ]   TIMM44 [ EBI - ARRAY_EXPRESS ]   TIMM44 [ SEEK ]   TIMM44 [ MEM ]
Gene Expression Viewer (FireBrowse)TIMM44 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10469
GTEX Portal (Tissue expression)TIMM44
Protein : pattern, domain, 3D structure
UniProt/SwissProtO43615   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO43615  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO43615
Splice isoforms : SwissVarO43615
PhosPhoSitePlusO43615
Domains : Interpro (EBI)NTF2-like_dom    Tim44    Tim44-like_dom   
Domain families : Pfam (Sanger)Tim44 (PF04280)   
Domain families : Pfam (NCBI)pfam04280   
Domain families : Smart (EMBL)Tim44 (SM00978)  
Conserved Domain (NCBI)TIMM44
DMDM Disease mutations10469
Blocks (Seattle)TIMM44
PDB (SRS)2CW9   
PDB (PDBSum)2CW9   
PDB (IMB)2CW9   
PDB (RSDB)2CW9   
Structural Biology KnowledgeBase2CW9   
SCOP (Structural Classification of Proteins)2CW9   
CATH (Classification of proteins structures)2CW9   
SuperfamilyO43615
Human Protein AtlasENSG00000104980
Peptide AtlasO43615
HPRD05450
IPIIPI00306516   
Protein Interaction databases
DIP (DOE-UCLA)O43615
IntAct (EBI)O43615
FunCoupENSG00000104980
BioGRIDTIMM44
STRING (EMBL)TIMM44
ZODIACTIMM44
Ontologies - Pathways
QuickGOO43615
Ontology : AmiGOprotein binding  ATP binding  mitochondrion  mitochondrial inner membrane  mitochondrial matrix  protein targeting to mitochondrion  protein import into mitochondrial matrix  chaperone binding  
Ontology : EGO-EBIprotein binding  ATP binding  mitochondrion  mitochondrial inner membrane  mitochondrial matrix  protein targeting to mitochondrion  protein import into mitochondrial matrix  chaperone binding  
NDEx NetworkTIMM44
Atlas of Cancer Signalling NetworkTIMM44
Wikipedia pathwaysTIMM44
Orthology - Evolution
OrthoDB10469
GeneTree (enSembl)ENSG00000104980
Phylogenetic Trees/Animal Genes : TreeFamTIMM44
HOVERGENO43615
HOGENOMO43615
Homologs : HomoloGeneTIMM44
Homology/Alignments : Family Browser (UCSC)TIMM44
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTIMM44 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TIMM44
dbVarTIMM44
ClinVarTIMM44
1000_GenomesTIMM44 
Exome Variant ServerTIMM44
ExAC (Exome Aggregation Consortium)TIMM44 (select the gene name)
Genetic variants : HAPMAP10469
Genomic Variants (DGV)TIMM44 [DGVbeta]
DECIPHER (Syndromes)19:7991603-8008708  ENSG00000104980
CONAN: Copy Number AnalysisTIMM44 
Mutations
ICGC Data PortalTIMM44 
TCGA Data PortalTIMM44 
Broad Tumor PortalTIMM44
OASIS PortalTIMM44 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTIMM44  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTIMM44
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch TIMM44
DgiDB (Drug Gene Interaction Database)TIMM44
DoCM (Curated mutations)TIMM44 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TIMM44 (select a term)
intoGenTIMM44
Cancer3DTIMM44(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605058   
Orphanet
MedgenTIMM44
Genetic Testing Registry TIMM44
NextProtO43615 [Medical]
TSGene10469
GENETestsTIMM44
Huge Navigator TIMM44 [HugePedia]
snp3D : Map Gene to Disease10469
BioCentury BCIQTIMM44
ClinGenTIMM44
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD10469
Chemical/Pharm GKB GenePA38229
Clinical trialTIMM44
Miscellaneous
canSAR (ICR)TIMM44 (select the gene name)
Probes
Litterature
PubMed19 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTIMM44
EVEXTIMM44
GoPubMedTIMM44
iHOPTIMM44
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 13:31:08 CET 2017

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