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TIMM8B (translocase of inner mitochondrial membrane 8 homolog B)

Identity

Alias_namestranslocase of inner mitochondrial membrane 8 homolog B (yeast)
Alias_symbol (synonym)TIM8B
DDP2
FLJ21744
MGC102866
MGC117373
Other alias
HGNC (Hugo) TIMM8B
LocusID (NCBI) 26521
Atlas_Id 42569
Location 11q23.1  [Link to chromosome band 11q23]
Location_base_pair Starts at 112084811 and ends at 112086798 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TIMM8B   11818
Cards
Entrez_Gene (NCBI)TIMM8B  26521  translocase of inner mitochondrial membrane 8 homolog B
AliasesDDP2; TIM8B
GeneCards (Weizmann)TIMM8B
Ensembl hg19 (Hinxton)ENSG00000150779 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000150779 [Gene_View]  chr11:112084811-112086798 [Contig_View]  TIMM8B [Vega]
ICGC DataPortalENSG00000150779
TCGA cBioPortalTIMM8B
AceView (NCBI)TIMM8B
Genatlas (Paris)TIMM8B
WikiGenes26521
SOURCE (Princeton)TIMM8B
Genetics Home Reference (NIH)TIMM8B
Genomic and cartography
GoldenPath hg38 (UCSC)TIMM8B  -     chr11:112084811-112086798 -  11q23.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TIMM8B  -     11q23.1   [Description]    (hg19-Feb_2009)
EnsemblTIMM8B - 11q23.1 [CytoView hg19]  TIMM8B - 11q23.1 [CytoView hg38]
Mapping of homologs : NCBITIMM8B [Mapview hg19]  TIMM8B [Mapview hg38]
OMIM606659   
Gene and transcription
Genbank (Entrez)AF150087 AF152350 AF165967 AK025397 AK312169
RefSeq transcript (Entrez)NM_012459
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TIMM8B
Cluster EST : UnigeneHs.279915 [ NCBI ]
CGAP (NCI)Hs.279915
Alternative Splicing GalleryENSG00000150779
Gene ExpressionTIMM8B [ NCBI-GEO ]   TIMM8B [ EBI - ARRAY_EXPRESS ]   TIMM8B [ SEEK ]   TIMM8B [ MEM ]
Gene Expression Viewer (FireBrowse)TIMM8B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)26521
GTEX Portal (Tissue expression)TIMM8B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y5J9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9Y5J9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9Y5J9
Splice isoforms : SwissVarQ9Y5J9
PhosPhoSitePlusQ9Y5J9
Domains : Interpro (EBI)Tim10/DDP_fam_Znf   
Domain families : Pfam (Sanger)zf-Tim10_DDP (PF02953)   
Domain families : Pfam (NCBI)pfam02953   
Conserved Domain (NCBI)TIMM8B
DMDM Disease mutations26521
Blocks (Seattle)TIMM8B
SuperfamilyQ9Y5J9
Human Protein AtlasENSG00000150779
Peptide AtlasQ9Y5J9
HPRD16228
IPIIPI01015642   IPI00964886   IPI00967384   
Protein Interaction databases
DIP (DOE-UCLA)Q9Y5J9
IntAct (EBI)Q9Y5J9
FunCoupENSG00000150779
BioGRIDTIMM8B
STRING (EMBL)TIMM8B
ZODIACTIMM8B
Ontologies - Pathways
QuickGOQ9Y5J9
Ontology : AmiGOextracellular space  mitochondrial inner membrane  protein targeting to mitochondrion  sensory perception of sound  zinc ion binding  membrane  metal ion transport  mitochondrial intermembrane space protein transporter complex  metal ion transmembrane transporter activity  chaperone-mediated protein transport  cation transmembrane transport  
Ontology : EGO-EBIextracellular space  mitochondrial inner membrane  protein targeting to mitochondrion  sensory perception of sound  zinc ion binding  membrane  metal ion transport  mitochondrial intermembrane space protein transporter complex  metal ion transmembrane transporter activity  chaperone-mediated protein transport  cation transmembrane transport  
NDEx NetworkTIMM8B
Atlas of Cancer Signalling NetworkTIMM8B
Wikipedia pathwaysTIMM8B
Orthology - Evolution
OrthoDB26521
GeneTree (enSembl)ENSG00000150779
Phylogenetic Trees/Animal Genes : TreeFamTIMM8B
HOVERGENQ9Y5J9
HOGENOMQ9Y5J9
Homologs : HomoloGeneTIMM8B
Homology/Alignments : Family Browser (UCSC)TIMM8B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTIMM8B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TIMM8B
dbVarTIMM8B
ClinVarTIMM8B
1000_GenomesTIMM8B 
Exome Variant ServerTIMM8B
ExAC (Exome Aggregation Consortium)TIMM8B (select the gene name)
Genetic variants : HAPMAP26521
Genomic Variants (DGV)TIMM8B [DGVbeta]
DECIPHERTIMM8B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTIMM8B 
Mutations
ICGC Data PortalTIMM8B 
TCGA Data PortalTIMM8B 
Broad Tumor PortalTIMM8B
OASIS PortalTIMM8B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTIMM8B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTIMM8B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch TIMM8B
DgiDB (Drug Gene Interaction Database)TIMM8B
DoCM (Curated mutations)TIMM8B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TIMM8B (select a term)
intoGenTIMM8B
Cancer3DTIMM8B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606659   
Orphanet
MedgenTIMM8B
Genetic Testing Registry TIMM8B
NextProtQ9Y5J9 [Medical]
TSGene26521
GENETestsTIMM8B
Target ValidationTIMM8B
Huge Navigator TIMM8B [HugePedia]
snp3D : Map Gene to Disease26521
BioCentury BCIQTIMM8B
ClinGenTIMM8B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26521
Chemical/Pharm GKB GenePA36524
Clinical trialTIMM8B
Miscellaneous
canSAR (ICR)TIMM8B (select the gene name)
Probes
Litterature
PubMed18 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTIMM8B
EVEXTIMM8B
GoPubMedTIMM8B
iHOPTIMM8B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:59:24 CEST 2017

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