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TIMM9 (translocase of inner mitochondrial membrane 9)

Identity

Alias_namestranslocase of inner mitochondrial membrane 9 (yeast) homolog
translocase of inner mitochondrial membrane 9 homolog (yeast)
Alias_symbol (synonym)TIM9A
Other aliasTIM9
HGNC (Hugo) TIMM9
LocusID (NCBI) 26520
Atlas_Id 42570
Location 14q23.1  [Link to chromosome band 14q23]
Location_base_pair Starts at 58875212 and ends at 58894332 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
CADM1 (11q23.3) / TIMM9 (14q23.1)TIMM9 (14q23.1) / FCF1 (14q24.3)TIMM9 14q23.1 / FCF1 14q24.3

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TIMM9   11819
Cards
Entrez_Gene (NCBI)TIMM9  26520  translocase of inner mitochondrial membrane 9
AliasesTIM9; TIM9A
GeneCards (Weizmann)TIMM9
Ensembl hg19 (Hinxton)ENSG00000100575 [Gene_View]  chr14:58875212-58894332 [Contig_View]  TIMM9 [Vega]
Ensembl hg38 (Hinxton)ENSG00000100575 [Gene_View]  chr14:58875212-58894332 [Contig_View]  TIMM9 [Vega]
ICGC DataPortalENSG00000100575
TCGA cBioPortalTIMM9
AceView (NCBI)TIMM9
Genatlas (Paris)TIMM9
WikiGenes26520
SOURCE (Princeton)TIMM9
Genetics Home Reference (NIH)TIMM9
Genomic and cartography
GoldenPath hg19 (UCSC)TIMM9  -     chr14:58875212-58894332 -  14q23.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)TIMM9  -     14q23.1   [Description]    (hg38-Dec_2013)
EnsemblTIMM9 - 14q23.1 [CytoView hg19]  TIMM9 - 14q23.1 [CytoView hg38]
Mapping of homologs : NCBITIMM9 [Mapview hg19]  TIMM9 [Mapview hg38]
OMIM607384   
Gene and transcription
Genbank (Entrez)AA889245 AF150100 AF152353 AK000666 AK312095
RefSeq transcript (Entrez)NM_001304485 NM_001304486 NM_001304487 NM_001304488 NM_001304489 NM_001304490 NM_001304491 NM_012460
RefSeq genomic (Entrez)NC_000014 NC_018925 NT_026437 NW_004929393
Consensus coding sequences : CCDS (NCBI)TIMM9
Cluster EST : UnigeneHs.440525 [ NCBI ]
CGAP (NCI)Hs.440525
Alternative Splicing GalleryENSG00000100575
Gene ExpressionTIMM9 [ NCBI-GEO ]   TIMM9 [ EBI - ARRAY_EXPRESS ]   TIMM9 [ SEEK ]   TIMM9 [ MEM ]
Gene Expression Viewer (FireBrowse)TIMM9 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)26520
GTEX Portal (Tissue expression)TIMM9
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y5J7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9Y5J7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9Y5J7
Splice isoforms : SwissVarQ9Y5J7
PhosPhoSitePlusQ9Y5J7
Domains : Interpro (EBI)Tim10/DDP_fam_Znf   
Domain families : Pfam (Sanger)zf-Tim10_DDP (PF02953)   
Domain families : Pfam (NCBI)pfam02953   
Conserved Domain (NCBI)TIMM9
DMDM Disease mutations26520
Blocks (Seattle)TIMM9
PDB (SRS)2BSK   
PDB (PDBSum)2BSK   
PDB (IMB)2BSK   
PDB (RSDB)2BSK   
Structural Biology KnowledgeBase2BSK   
SCOP (Structural Classification of Proteins)2BSK   
CATH (Classification of proteins structures)2BSK   
SuperfamilyQ9Y5J7
Human Protein AtlasENSG00000100575
Peptide AtlasQ9Y5J7
HPRD09574
IPIIPI00001541   IPI01026459   IPI01026499   IPI01025955   
Protein Interaction databases
DIP (DOE-UCLA)Q9Y5J7
IntAct (EBI)Q9Y5J7
FunCoupENSG00000100575
BioGRIDTIMM9
STRING (EMBL)TIMM9
ZODIACTIMM9
Ontologies - Pathways
QuickGOQ9Y5J7
Ontology : AmiGOtransporter activity  protein binding  mitochondrion  mitochondrial inner membrane  mitochondrial inner membrane  mitochondrial intermembrane space  protein targeting to mitochondrion  sensory perception of sound  zinc ion binding  protein transporter activity  mitochondrial intermembrane space protein transporter complex  mitochondrial intermembrane space protein transporter complex  mitochondrial inner membrane protein insertion complex  protein homodimerization activity  protein import into mitochondrial inner membrane  protein import into mitochondrial inner membrane  chaperone binding  chaperone-mediated protein transport  
Ontology : EGO-EBItransporter activity  protein binding  mitochondrion  mitochondrial inner membrane  mitochondrial inner membrane  mitochondrial intermembrane space  protein targeting to mitochondrion  sensory perception of sound  zinc ion binding  protein transporter activity  mitochondrial intermembrane space protein transporter complex  mitochondrial intermembrane space protein transporter complex  mitochondrial inner membrane protein insertion complex  protein homodimerization activity  protein import into mitochondrial inner membrane  protein import into mitochondrial inner membrane  chaperone binding  chaperone-mediated protein transport  
NDEx NetworkTIMM9
Atlas of Cancer Signalling NetworkTIMM9
Wikipedia pathwaysTIMM9
Orthology - Evolution
OrthoDB26520
GeneTree (enSembl)ENSG00000100575
Phylogenetic Trees/Animal Genes : TreeFamTIMM9
HOVERGENQ9Y5J7
HOGENOMQ9Y5J7
Homologs : HomoloGeneTIMM9
Homology/Alignments : Family Browser (UCSC)TIMM9
Gene fusions - Rearrangements
Fusion : MitelmanTIMM9/FCF1 [14q23.1/14q24.3]  
Fusion: TCGATIMM9 14q23.1 FCF1 14q24.3 LGG
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTIMM9 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TIMM9
dbVarTIMM9
ClinVarTIMM9
1000_GenomesTIMM9 
Exome Variant ServerTIMM9
ExAC (Exome Aggregation Consortium)TIMM9 (select the gene name)
Genetic variants : HAPMAP26520
Genomic Variants (DGV)TIMM9 [DGVbeta]
DECIPHER (Syndromes)14:58875212-58894332  ENSG00000100575
CONAN: Copy Number AnalysisTIMM9 
Mutations
ICGC Data PortalTIMM9 
TCGA Data PortalTIMM9 
Broad Tumor PortalTIMM9
OASIS PortalTIMM9 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTIMM9  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTIMM9
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch TIMM9
DgiDB (Drug Gene Interaction Database)TIMM9
DoCM (Curated mutations)TIMM9 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TIMM9 (select a term)
intoGenTIMM9
Cancer3DTIMM9(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607384   
Orphanet
MedgenTIMM9
Genetic Testing Registry TIMM9
NextProtQ9Y5J7 [Medical]
TSGene26520
GENETestsTIMM9
Huge Navigator TIMM9 [HugePedia]
snp3D : Map Gene to Disease26520
BioCentury BCIQTIMM9
ClinGenTIMM9
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26520
Chemical/Pharm GKB GenePA36525
Clinical trialTIMM9
Miscellaneous
canSAR (ICR)TIMM9 (select the gene name)
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTIMM9
EVEXTIMM9
GoPubMedTIMM9
iHOPTIMM9
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:22:28 CEST 2017

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