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TIMMDC1 (translocase of inner mitochondrial membrane domain containing 1)

Identity

Alias (NCBI)C3orf1
MC1DN31
HGNC (Hugo) TIMMDC1
HGNC Alias symbFLJ22597
HGNC Previous nameC3orf1
HGNC Previous namechromosome 3 open reading frame 1
LocusID (NCBI) 51300
Atlas_Id 58267
Location 3q13.33  [Link to chromosome band 3q13]
Location_base_pair Starts at 119498547 and ends at 119525090 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
RNASEK-C17orf49 (17p13.1) / TIMMDC1 (3q13.33)TIMMDC1 (3q13.33) / FAM160B1 (10q25.3)TIMMDC1 (3q13.33) / RBL2 (16q12.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TIMMDC1   1321
Cards
Entrez_Gene (NCBI)TIMMDC1    translocase of inner mitochondrial membrane domain containing 1
AliasesC3orf1; MC1DN31
GeneCards (Weizmann)TIMMDC1
Ensembl hg19 (Hinxton)ENSG00000113845 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000113845 [Gene_View]  ENSG00000113845 [Sequence]  chr3:119498547-119525090 [Contig_View]  TIMMDC1 [Vega]
ICGC DataPortalENSG00000113845
TCGA cBioPortalTIMMDC1
AceView (NCBI)TIMMDC1
Genatlas (Paris)TIMMDC1
SOURCE (Princeton)TIMMDC1
Genetics Home Reference (NIH)TIMMDC1
Genomic and cartography
GoldenPath hg38 (UCSC)TIMMDC1  -     chr3:119498547-119525090 +  3q13.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TIMMDC1  -     3q13.33   [Description]    (hg19-Feb_2009)
GoldenPathTIMMDC1 - 3q13.33 [CytoView hg19]  TIMMDC1 - 3q13.33 [CytoView hg38]
ImmunoBaseENSG00000113845
Genome Data Viewer NCBITIMMDC1 [Mapview hg19]  
OMIM615534   618251   
Gene and transcription
Genbank (Entrez)AF139077 AF210057 AK026250 AK225954 AL136622
RefSeq transcript (Entrez)NM_016589
Consensus coding sequences : CCDS (NCBI)TIMMDC1
Gene ExpressionTIMMDC1 [ NCBI-GEO ]   TIMMDC1 [ EBI - ARRAY_EXPRESS ]   TIMMDC1 [ SEEK ]   TIMMDC1 [ MEM ]
Gene Expression Viewer (FireBrowse)TIMMDC1 [ Firebrowse - Broad ]
GenevisibleExpression of TIMMDC1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51300
GTEX Portal (Tissue expression)TIMMDC1
Human Protein AtlasENSG00000113845-TIMMDC1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NPL8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NPL8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NPL8
PhosPhoSitePlusQ9NPL8
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TIMMDC1
SuperfamilyQ9NPL8
AlphaFold pdb e-kbQ9NPL8   
Human Protein Atlas [tissue]ENSG00000113845-TIMMDC1 [tissue]
Protein Interaction databases
DIP (DOE-UCLA)Q9NPL8
IntAct (EBI)Q9NPL8
BioGRIDTIMMDC1
STRING (EMBL)TIMMDC1
ZODIACTIMMDC1
Ontologies - Pathways
QuickGOQ9NPL8
Ontology : AmiGOprotein binding  nucleoplasm  mitochondrion  mitochondrion  mitochondrial inner membrane  integral component of membrane  mitochondrial respiratory chain complex I assembly  
Ontology : EGO-EBIprotein binding  nucleoplasm  mitochondrion  mitochondrion  mitochondrial inner membrane  integral component of membrane  mitochondrial respiratory chain complex I assembly  
NDEx NetworkTIMMDC1
Atlas of Cancer Signalling NetworkTIMMDC1
Wikipedia pathwaysTIMMDC1
Orthology - Evolution
OrthoDB51300
GeneTree (enSembl)ENSG00000113845
Phylogenetic Trees/Animal Genes : TreeFamTIMMDC1
Homologs : HomoloGeneTIMMDC1
Homology/Alignments : Family Browser (UCSC)TIMMDC1
Gene fusions - Rearrangements
Fusion : QuiverTIMMDC1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTIMMDC1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TIMMDC1
dbVarTIMMDC1
ClinVarTIMMDC1
MonarchTIMMDC1
1000_GenomesTIMMDC1 
Exome Variant ServerTIMMDC1
GNOMAD BrowserENSG00000113845
Varsome BrowserTIMMDC1
ACMGTIMMDC1 variants
VarityQ9NPL8
Genomic Variants (DGV)TIMMDC1 [DGVbeta]
DECIPHERTIMMDC1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTIMMDC1 
Mutations
ICGC Data PortalTIMMDC1 
TCGA Data PortalTIMMDC1 
Broad Tumor PortalTIMMDC1
OASIS PortalTIMMDC1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTIMMDC1  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTIMMDC1
Mutations and Diseases : HGMDTIMMDC1
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTIMMDC1
DgiDB (Drug Gene Interaction Database)TIMMDC1
DoCM (Curated mutations)TIMMDC1
CIViC (Clinical Interpretations of Variants in Cancer)TIMMDC1
Cancer3DTIMMDC1
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615534    618251   
Orphanet
DisGeNETTIMMDC1
MedgenTIMMDC1
Genetic Testing Registry TIMMDC1
NextProtQ9NPL8 [Medical]
GENETestsTIMMDC1
Target ValidationTIMMDC1
Huge Navigator TIMMDC1 [HugePedia]
ClinGenTIMMDC1
Clinical trials, drugs, therapy
MyCancerGenomeTIMMDC1
Protein Interactions : CTDTIMMDC1
PharosQ9NPL8
Clinical trialTIMMDC1
Miscellaneous
canSAR (ICR)TIMMDC1
HarmonizomeTIMMDC1
DataMed IndexTIMMDC1
Probes
Litterature
PubMed51 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTIMMDC1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:35:08 CEST 2021

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