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TINAG (tubulointerstitial nephritis antigen)

Identity

Alias (NCBI)TIN-AG
HGNC (Hugo) TINAG
LocusID (NCBI) 27283
Atlas_Id 74708
Location 6p12.1  [Link to chromosome band 6p12]
Location_base_pair Starts at 54308441 and ends at 54390142 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TINAG   14599
Cards
Entrez_Gene (NCBI)TINAG    tubulointerstitial nephritis antigen
AliasesTIN-AG
GeneCards (Weizmann)TINAG
Ensembl hg19 (Hinxton)ENSG00000137251 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000137251 [Gene_View]  ENSG00000137251 [Sequence]  chr6:54308441-54390142 [Contig_View]  TINAG [Vega]
ICGC DataPortalENSG00000137251
TCGA cBioPortalTINAG
AceView (NCBI)TINAG
Genatlas (Paris)TINAG
SOURCE (Princeton)TINAG
Genetics Home Reference (NIH)TINAG
Genomic and cartography
GoldenPath hg38 (UCSC)TINAG  -     chr6:54308441-54390142 +  6p12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TINAG  -     6p12.1   [Description]    (hg19-Feb_2009)
GoldenPathTINAG - 6p12.1 [CytoView hg19]  TINAG - 6p12.1 [CytoView hg38]
ImmunoBaseENSG00000137251
Genome Data Viewer NCBITINAG [Mapview hg19]  
OMIM606749   
Gene and transcription
Genbank (Entrez)AB022277 AF195116 AF195117 AK312918 AW027949
RefSeq transcript (Entrez)NM_014464
Consensus coding sequences : CCDS (NCBI)TINAG
Gene ExpressionTINAG [ NCBI-GEO ]   TINAG [ EBI - ARRAY_EXPRESS ]   TINAG [ SEEK ]   TINAG [ MEM ]
Gene Expression Viewer (FireBrowse)TINAG [ Firebrowse - Broad ]
GenevisibleExpression of TINAG in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)27283
GTEX Portal (Tissue expression)TINAG
Human Protein AtlasENSG00000137251-TINAG [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UJW2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UJW2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UJW2
PhosPhoSitePlusQ9UJW2
Domaine pattern : Prosite (Expaxy)SMB_1 (PS00524)    SMB_2 (PS50958)    THIOL_PROTEASE_ASN (PS00640)   
Domains : Interpro (EBI)Papain-like_cys_pep_sf    Pept_asp_AS    Peptidase_C1A_C    Somatomedin_B_dom    TINAG   
Domain families : Pfam (Sanger)Peptidase_C1 (PF00112)    Somatomedin_B (PF01033)   
Domain families : Pfam (NCBI)pfam00112    pfam01033   
Domain families : Smart (EMBL)Pept_C1 (SM00645)  SO (SM00201)  
Conserved Domain (NCBI)TINAG
SuperfamilyQ9UJW2
AlphaFold pdb e-kbQ9UJW2   
Human Protein Atlas [tissue]ENSG00000137251-TINAG [tissue]
HPRD09483
Protein Interaction databases
DIP (DOE-UCLA)Q9UJW2
IntAct (EBI)Q9UJW2
BioGRIDTINAG
STRING (EMBL)TINAG
ZODIACTINAG
Ontologies - Pathways
QuickGOQ9UJW2
Ontology : AmiGOnucleotide binding  cysteine-type endopeptidase activity  basement membrane  extracellular space  lysosome  proteolysis  cell adhesion  
Ontology : EGO-EBInucleotide binding  cysteine-type endopeptidase activity  basement membrane  extracellular space  lysosome  proteolysis  cell adhesion  
NDEx NetworkTINAG
Atlas of Cancer Signalling NetworkTINAG
Wikipedia pathwaysTINAG
Orthology - Evolution
OrthoDB27283
GeneTree (enSembl)ENSG00000137251
Phylogenetic Trees/Animal Genes : TreeFamTINAG
Homologs : HomoloGeneTINAG
Homology/Alignments : Family Browser (UCSC)TINAG
Gene fusions - Rearrangements
Fusion : QuiverTINAG
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTINAG [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TINAG
dbVarTINAG
ClinVarTINAG
MonarchTINAG
1000_GenomesTINAG 
Exome Variant ServerTINAG
GNOMAD BrowserENSG00000137251
Varsome BrowserTINAG
ACMGTINAG variants
VarityQ9UJW2
Genomic Variants (DGV)TINAG [DGVbeta]
DECIPHERTINAG [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTINAG 
Mutations
ICGC Data PortalTINAG 
TCGA Data PortalTINAG 
Broad Tumor PortalTINAG
OASIS PortalTINAG [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTINAG  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTINAG
Mutations and Diseases : HGMDTINAG
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTINAG
DgiDB (Drug Gene Interaction Database)TINAG
DoCM (Curated mutations)TINAG
CIViC (Clinical Interpretations of Variants in Cancer)TINAG
Cancer3DTINAG
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606749   
Orphanet
DisGeNETTINAG
MedgenTINAG
Genetic Testing Registry TINAG
NextProtQ9UJW2 [Medical]
GENETestsTINAG
Target ValidationTINAG
Huge Navigator TINAG [HugePedia]
ClinGenTINAG
Clinical trials, drugs, therapy
MyCancerGenomeTINAG
Protein Interactions : CTDTINAG
Pharm GKB GenePA37905
PharosQ9UJW2
Clinical trialTINAG
Miscellaneous
canSAR (ICR)TINAG
HarmonizomeTINAG
DataMed IndexTINAG
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTINAG
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:25:33 CEST 2021

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