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TIPARP (TCDD inducible poly(ADP-ribose) polymerase)

Identity

Alias (NCBI)ARTD14
PARP7
pART14
HGNC (Hugo) TIPARP
HGNC Alias symbDKFZP434J214
DKFZp686N0351
DDF1
PARP7
PARP-7
PARP-1
pART14
RM1
ARTD14
HGNC Previous nameTCDD-inducible poly(ADP-ribose) polymerase
LocusID (NCBI) 25976
Atlas_Id 51750
Location 3q25.31  [Link to chromosome band 3q25]
Location_base_pair Starts at 156674590 and ends at 156706768 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TIPARP   23696
Cards
Entrez_Gene (NCBI)TIPARP    TCDD inducible poly(ADP-ribose) polymerase
AliasesARTD14; PARP7; pART14
GeneCards (Weizmann)TIPARP
Ensembl hg19 (Hinxton)ENSG00000163659 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000163659 [Gene_View]  ENSG00000163659 [Sequence]  chr3:156674590-156706768 [Contig_View]  TIPARP [Vega]
ICGC DataPortalENSG00000163659
TCGA cBioPortalTIPARP
AceView (NCBI)TIPARP
Genatlas (Paris)TIPARP
SOURCE (Princeton)TIPARP
Genetics Home Reference (NIH)TIPARP
Genomic and cartography
GoldenPath hg38 (UCSC)TIPARP  -     chr3:156674590-156706768 +  3q25.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TIPARP  -     3q25.31   [Description]    (hg19-Feb_2009)
GoldenPathTIPARP - 3q25.31 [CytoView hg19]  TIPARP - 3q25.31 [CytoView hg38]
ImmunoBaseENSG00000163659
Genome Data Viewer NCBITIPARP [Mapview hg19]  
OMIM612480   
Gene and transcription
Genbank (Entrez)AK097785 AK291261 AL080156 BC034397 BC050350
RefSeq transcript (Entrez)NM_001184717 NM_001184718 NM_015508
Consensus coding sequences : CCDS (NCBI)TIPARP
Gene ExpressionTIPARP [ NCBI-GEO ]   TIPARP [ EBI - ARRAY_EXPRESS ]   TIPARP [ SEEK ]   TIPARP [ MEM ]
Gene Expression Viewer (FireBrowse)TIPARP [ Firebrowse - Broad ]
GenevisibleExpression of TIPARP in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)25976
GTEX Portal (Tissue expression)TIPARP
Human Protein AtlasENSG00000163659-TIPARP [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ7Z3E1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ7Z3E1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ7Z3E1
PhosPhoSitePlusQ7Z3E1
Domaine pattern : Prosite (Expaxy)PARP_CATALYTIC (PS51059)    WWE (PS50918)    ZF_C3H1 (PS50103)   
Domains : Interpro (EBI)Poly(ADP-ribose)pol_cat_dom    WWE-dom    WWE_dom_sf    Znf_CCCH   
Domain families : Pfam (Sanger)PARP (PF00644)   
Domain families : Pfam (NCBI)pfam00644   
Conserved Domain (NCBI)TIPARP
SuperfamilyQ7Z3E1
AlphaFold pdb e-kbQ7Z3E1   
Human Protein Atlas [tissue]ENSG00000163659-TIPARP [tissue]
HPRD18192
Protein Interaction databases
DIP (DOE-UCLA)Q7Z3E1
IntAct (EBI)Q7Z3E1
BioGRIDTIPARP
STRING (EMBL)TIPARP
ZODIACTIPARP
Ontologies - Pathways
QuickGOQ7Z3E1
Ontology : AmiGOcis-regulatory region sequence-specific DNA binding  vasculogenesis  kidney development  NAD+ ADP-ribosyltransferase activity  nucleus  protein ADP-ribosylation  androgen metabolic process  estrogen metabolic process  female gonad development  post-embryonic development  negative regulation of gene expression  hemopoiesis  positive regulation of protein catabolic process  metal ion binding  platelet-derived growth factor receptor signaling pathway  skeletal system morphogenesis  smooth muscle tissue development  roof of mouth development  face morphogenesis  protein auto-ADP-ribosylation  cellular response to organic cyclic compound  protein mono-ADP-ribosylation  response to 2,3,7,8-tetrachlorodibenzodioxine  protein ADP-ribosylase activity  
Ontology : EGO-EBIcis-regulatory region sequence-specific DNA binding  vasculogenesis  kidney development  NAD+ ADP-ribosyltransferase activity  nucleus  protein ADP-ribosylation  androgen metabolic process  estrogen metabolic process  female gonad development  post-embryonic development  negative regulation of gene expression  hemopoiesis  positive regulation of protein catabolic process  metal ion binding  platelet-derived growth factor receptor signaling pathway  skeletal system morphogenesis  smooth muscle tissue development  roof of mouth development  face morphogenesis  protein auto-ADP-ribosylation  cellular response to organic cyclic compound  protein mono-ADP-ribosylation  response to 2,3,7,8-tetrachlorodibenzodioxine  protein ADP-ribosylase activity  
NDEx NetworkTIPARP
Atlas of Cancer Signalling NetworkTIPARP
Wikipedia pathwaysTIPARP
Orthology - Evolution
OrthoDB25976
GeneTree (enSembl)ENSG00000163659
Phylogenetic Trees/Animal Genes : TreeFamTIPARP
Homologs : HomoloGeneTIPARP
Homology/Alignments : Family Browser (UCSC)TIPARP
Gene fusions - Rearrangements
Fusion : QuiverTIPARP
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTIPARP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TIPARP
dbVarTIPARP
ClinVarTIPARP
MonarchTIPARP
1000_GenomesTIPARP 
Exome Variant ServerTIPARP
GNOMAD BrowserENSG00000163659
Varsome BrowserTIPARP
ACMGTIPARP variants
VarityQ7Z3E1
Genomic Variants (DGV)TIPARP [DGVbeta]
DECIPHERTIPARP [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTIPARP 
Mutations
ICGC Data PortalTIPARP 
TCGA Data PortalTIPARP 
Broad Tumor PortalTIPARP
OASIS PortalTIPARP [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTIPARP  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTIPARP
Mutations and Diseases : HGMDTIPARP
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTIPARP
DgiDB (Drug Gene Interaction Database)TIPARP
DoCM (Curated mutations)TIPARP
CIViC (Clinical Interpretations of Variants in Cancer)TIPARP
Cancer3DTIPARP
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612480   
Orphanet
DisGeNETTIPARP
MedgenTIPARP
Genetic Testing Registry TIPARP
NextProtQ7Z3E1 [Medical]
GENETestsTIPARP
Target ValidationTIPARP
Huge Navigator TIPARP [HugePedia]
ClinGenTIPARP
Clinical trials, drugs, therapy
MyCancerGenomeTIPARP
Protein Interactions : CTDTIPARP
Pharm GKB GenePA134885396
PharosQ7Z3E1
Clinical trialTIPARP
Miscellaneous
canSAR (ICR)TIPARP
HarmonizomeTIPARP
DataMed IndexTIPARP
Probes
Litterature
PubMed29 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTIPARP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:35:09 CEST 2021

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