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TIPRL (TOR signaling pathway regulator)

Identity

Alias (NCBI)TIP
TIP41
TIPRL1
HGNC (Hugo) TIPRL
HGNC Alias symbMGC3794
dJ69E11.3
TIP41
TIPRL1
HGNC Previous nameTIP41, TOR signaling pathway regulator-like (S. cerevisiae)
LocusID (NCBI) 261726
Atlas_Id 53169
Location 1q24.2  [Link to chromosome band 1q24]
Location_base_pair Starts at 168178962 and ends at 168202109 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
TIPRL (1q24.2) / CCL22 (16q13)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TIPRL   30231
Cards
Entrez_Gene (NCBI)TIPRL    TOR signaling pathway regulator
AliasesTIP; TIP41; TIPRL1
GeneCards (Weizmann)TIPRL
Ensembl hg19 (Hinxton)ENSG00000143155 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000143155 [Gene_View]  ENSG00000143155 [Sequence]  chr1:168178962-168202109 [Contig_View]  TIPRL [Vega]
ICGC DataPortalENSG00000143155
TCGA cBioPortalTIPRL
AceView (NCBI)TIPRL
Genatlas (Paris)TIPRL
SOURCE (Princeton)TIPRL
Genetics Home Reference (NIH)TIPRL
Genomic and cartography
GoldenPath hg38 (UCSC)TIPRL  -     chr1:168178962-168202109 +  1q24.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TIPRL  -     1q24.2   [Description]    (hg19-Feb_2009)
GoldenPathTIPRL - 1q24.2 [CytoView hg19]  TIPRL - 1q24.2 [CytoView hg38]
ImmunoBaseENSG00000143155
Genome Data Viewer NCBITIPRL [Mapview hg19]  
OMIM611807   
Gene and transcription
Genbank (Entrez)AB097034 AI167356 AK313520 AL049670 BC009506
RefSeq transcript (Entrez)NM_001031800 NM_152902
Consensus coding sequences : CCDS (NCBI)TIPRL
Gene ExpressionTIPRL [ NCBI-GEO ]   TIPRL [ EBI - ARRAY_EXPRESS ]   TIPRL [ SEEK ]   TIPRL [ MEM ]
Gene Expression Viewer (FireBrowse)TIPRL [ Firebrowse - Broad ]
GenevisibleExpression of TIPRL in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)261726
GTEX Portal (Tissue expression)TIPRL
Human Protein AtlasENSG00000143155-TIPRL [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO75663   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO75663  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO75663
PhosPhoSitePlusO75663
Domains : Interpro (EBI)TIP41-like   
Domain families : Pfam (Sanger)TIP41 (PF04176)   
Domain families : Pfam (NCBI)pfam04176   
Conserved Domain (NCBI)TIPRL
PDB (RSDB)5D9G   
PDB Europe5D9G   
PDB (PDBSum)5D9G   
PDB (IMB)5D9G   
Structural Biology KnowledgeBase5D9G   
SCOP (Structural Classification of Proteins)5D9G   
CATH (Classification of proteins structures)5D9G   
SuperfamilyO75663
AlphaFold pdb e-kbO75663   
Human Protein Atlas [tissue]ENSG00000143155-TIPRL [tissue]
HPRD14608
Protein Interaction databases
DIP (DOE-UCLA)O75663
IntAct (EBI)O75663
BioGRIDTIPRL
STRING (EMBL)TIPRL
ZODIACTIPRL
Ontologies - Pathways
QuickGOO75663
Ontology : AmiGODNA damage checkpoint signaling  protein binding  cytosol  TOR signaling  negative regulation of phosphoprotein phosphatase activity  regulation of phosphoprotein phosphatase activity  
Ontology : EGO-EBIDNA damage checkpoint signaling  protein binding  cytosol  TOR signaling  negative regulation of phosphoprotein phosphatase activity  regulation of phosphoprotein phosphatase activity  
NDEx NetworkTIPRL
Atlas of Cancer Signalling NetworkTIPRL
Wikipedia pathwaysTIPRL
Orthology - Evolution
OrthoDB261726
GeneTree (enSembl)ENSG00000143155
Phylogenetic Trees/Animal Genes : TreeFamTIPRL
Homologs : HomoloGeneTIPRL
Homology/Alignments : Family Browser (UCSC)TIPRL
Gene fusions - Rearrangements
Fusion : QuiverTIPRL
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTIPRL [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TIPRL
dbVarTIPRL
ClinVarTIPRL
MonarchTIPRL
1000_GenomesTIPRL 
Exome Variant ServerTIPRL
GNOMAD BrowserENSG00000143155
Varsome BrowserTIPRL
ACMGTIPRL variants
VarityO75663
Genomic Variants (DGV)TIPRL [DGVbeta]
DECIPHERTIPRL [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTIPRL 
Mutations
ICGC Data PortalTIPRL 
TCGA Data PortalTIPRL 
Broad Tumor PortalTIPRL
OASIS PortalTIPRL [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTIPRL  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTIPRL
Mutations and Diseases : HGMDTIPRL
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTIPRL
DgiDB (Drug Gene Interaction Database)TIPRL
DoCM (Curated mutations)TIPRL
CIViC (Clinical Interpretations of Variants in Cancer)TIPRL
Cancer3DTIPRL
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611807   
Orphanet
DisGeNETTIPRL
MedgenTIPRL
Genetic Testing Registry TIPRL
NextProtO75663 [Medical]
GENETestsTIPRL
Target ValidationTIPRL
Huge Navigator TIPRL [HugePedia]
ClinGenTIPRL
Clinical trials, drugs, therapy
MyCancerGenomeTIPRL
Protein Interactions : CTDTIPRL
Pharm GKB GenePA142670811
PharosO75663
Clinical trialTIPRL
Miscellaneous
canSAR (ICR)TIPRL
HarmonizomeTIPRL
DataMed IndexTIPRL
Probes
Litterature
PubMed43 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTIPRL
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:35:10 CEST 2021

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