TM4SF5 (transmembrane 4 L six family member 5)

Identity

Other names	-
HGNC	TM4SF5
Location	17p13.3
Location_base_pair	Starts at 4621936 and ends at 4633253 bp from pter (hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	TM4SF5   11857
Entrez_Gene	TM4SF5  9032  transmembrane 4 L six family member 5
	Cards
GeneCards	TM4SF5
Ensembl	TM4SF5 [Search_View]   ENSG00000142484 [Gene_View]
Genatlas	TM4SF5
GeneLynx	TM4SF5
eGenome	TM4SF5
euGene	9032
	Genomic and cartography
GoldenPath	TM4SF5  -  17p13.3   chr17:4621936-4633253 +  17p13.2   [Description]    (hg18-March_2006)
Ensembl	TM4SF5 - 17p13.2 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	TM4SF5
	Gene and transcription
Genbank	AF027204 [ ENTREZ ]
Genbank	BC069519 [ ENTREZ ]
Genbank	BC093688 [ ENTREZ ]
Genbank	BC117163 [ ENTREZ ]
Genbank	CR456925 [ ENTREZ ]
RefSeq	NM_003963 [ SRS ]    NM_003963 [ ENTREZ ]
RefSeq	AC_000060 [ SRS ]    AC_000060 [ ENTREZ ]
RefSeq	AC_000149 [ SRS ]    AC_000149 [ ENTREZ ]
RefSeq	NC_000017 [ SRS ]    NC_000017 [ ENTREZ ]
RefSeq	NT_010718 [ SRS ]    NT_010718 [ ENTREZ ]
RefSeq	NW_001838403 [ SRS ]    NW_001838403 [ ENTREZ ]
RefSeq	NW_926584 [ SRS ]    NW_926584 [ ENTREZ ]
AceView	TM4SF5 AceView - NCBI
Unigene	Hs.184194 [ SRS ]    Hs.184194 [ NCBI ]     HS184194 [ spliceNest ]
Fast-db	1645 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	O14894 [ SRS]    O14894 [ EXPASY ]     O14894 [ INTERPRO ]     O14894 [ UNIPROT ]
Interpro	IPR008661 L6_membrane [ SRS ]    IPR008661 L6_membrane [ EBI ]
CluSTr	O14894
Pfam	PF05805 L6_membrane [ SRS ]    PF05805 L6_membrane [ Sanger ]    pfam05805 [ NCBI-CDD ]
Blocks	O14894
HPRD	06877
	Protein Interaction databases
DIP	O14894
IntAct	O14894
	Polymorphism : SNP, mutations, diseases
OMIM	604657    [ map ]
GENECLINICS	604657
SNP	TM4SF5 [dbSNP-NCBI]
SNP	NM_003963 [SNP-NCI]
SNP	TM4SF5 [GeneSNPs - Utah]  TM4SF5] [HGBASE - SRS]
HAPMAP	TM4SF5 [HAPMAP]
HGMD	TM4SF5
	General knowledge
Family Browser	TM4SF5 [UCSC Family Browser]
SOURCE	NM_003963
SMD	Hs.184194
SAGE	Hs.184194
GO	plasma membrane [Amigo]  plasma membrane
GO	integral to plasma membrane [Amigo]  integral to plasma membrane
GO	protein amino acid N-linked glycosylation [Amigo]  protein amino acid N-linked glycosylation
PubGene	TM4SF5
TreeFam	TM4SF5
CTD	9032 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	TM4SF5 Related clones (RZPD - Berlin)
	PubMed
PubMed	9 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 11 13:35:21 2008