Atlas of Genetics and Cytogenetics in Oncology and Haematology

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TMC2 (transmembrane channel like 2)


Alias (NCBI)C20orf145
HGNC (Hugo) TMC2
HGNC Alias symbdJ686C3.3
HGNC Previous nameC20orf145
HGNC Previous nametransmembrane, cochlear expressed, 2
LocusID (NCBI) 117532
Atlas_Id 54703
Location 20p13  [Link to chromosome band 20p13]
Location_base_pair Starts at 2536607 and ends at 2641784 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
EBF4 (20p13) / TMC2 (20p13)NBEAL2 (3p21.31) / TMC2 (20p13)EBF4 20p13 / TMC2 20p13
NBEAL2 3p21.31 / TMC2 20p13


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



Other Leukemias implicated (Data extracted from papers in the Atlas) [ 1 ]
  dup(20)(p13p13) TMC2/PTPRA

External links

HGNC (Hugo)TMC2   16527
Entrez_Gene (NCBI)TMC2    transmembrane channel like 2
GeneCards (Weizmann)TMC2
Ensembl hg19 (Hinxton)ENSG00000149488 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000149488 [Gene_View]  ENSG00000149488 [Sequence]  chr20:2536607-2641784 [Contig_View]  TMC2 [Vega]
ICGC DataPortalENSG00000149488
TCGA cBioPortalTMC2
AceView (NCBI)TMC2
Genatlas (Paris)TMC2
SOURCE (Princeton)TMC2
Genetics Home Reference (NIH)TMC2
Genomic and cartography
GoldenPath hg38 (UCSC)TMC2  -     chr20:2536607-2641784 +  20p13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMC2  -     20p13   [Description]    (hg19-Feb_2009)
GoldenPathTMC2 - 20p13 [CytoView hg19]  TMC2 - 20p13 [CytoView hg38]
Genome Data Viewer NCBITMC2 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AF417580 AK094789 AK127751 AK294013 AK309782
RefSeq transcript (Entrez)NM_080751
Consensus coding sequences : CCDS (NCBI)TMC2
Gene ExpressionTMC2 [ NCBI-GEO ]   TMC2 [ EBI - ARRAY_EXPRESS ]   TMC2 [ SEEK ]   TMC2 [ MEM ]
Gene Expression Viewer (FireBrowse)TMC2 [ Firebrowse - Broad ]
GenevisibleExpression of TMC2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)117532
GTEX Portal (Tissue expression)TMC2
Human Protein AtlasENSG00000149488-TMC2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TMC2
Human Protein Atlas [tissue]ENSG00000149488-TMC2 [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed22 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:35:19 CEST 2021

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