Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

TMED7-TICAM2 (TMED7-TICAM2 readthrough)

Identity

Alias (NCBI)MyD88-4
TICAM-2
TICAM2
TIRAP3
TIRP
TRAM
HGNC (Hugo) TMED7-TICAM2
LocusID (NCBI) 100302736
Atlas_Id 74766
Location 5q22.3  [Link to chromosome band 5q22]
Location_base_pair Starts at 115578496 and ends at 115626179 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
MGA (15q15.1) / TMED7-TICAM2 (5q22.3)PPDPF (20q13.33) / TMED7-TICAM2 (5q22.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)TMED7-TICAM2   33945
Cards
Entrez_Gene (NCBI)TMED7-TICAM2    TMED7-TICAM2 readthrough
AliasesMyD88-4; TICAM-2; TICAM2; TIRAP3; 
TIRP; TRAM
GeneCards (Weizmann)TMED7-TICAM2
Ensembl hg19 (Hinxton)ENSG00000251201 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000251201 [Gene_View]  ENSG00000251201 [Sequence]  chr5:115578496-115626179 [Contig_View]  TMED7-TICAM2 [Vega]
ICGC DataPortalENSG00000251201
TCGA cBioPortalTMED7-TICAM2
AceView (NCBI)TMED7-TICAM2
Genatlas (Paris)TMED7-TICAM2
SOURCE (Princeton)TMED7-TICAM2
Genetics Home Reference (NIH)TMED7-TICAM2
Genomic and cartography
GoldenPath hg38 (UCSC)TMED7-TICAM2  -     chr5:115578496-115626179 -  5q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMED7-TICAM2  -     5q22.3   [Description]    (hg19-Feb_2009)
GoldenPathTMED7-TICAM2 - 5q22.3 [CytoView hg19]  TMED7-TICAM2 - 5q22.3 [CytoView hg38]
ImmunoBaseENSG00000251201
Genome Data Viewer NCBITMED7-TICAM2 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK075218 AY275836 AY304581 AY304583 AY304584
RefSeq transcript (Entrez)NM_001164468 NM_001164469
Consensus coding sequences : CCDS (NCBI)TMED7-TICAM2
Gene ExpressionTMED7-TICAM2 [ NCBI-GEO ]   TMED7-TICAM2 [ EBI - ARRAY_EXPRESS ]   TMED7-TICAM2 [ SEEK ]   TMED7-TICAM2 [ MEM ]
Gene Expression Viewer (FireBrowse)TMED7-TICAM2 [ Firebrowse - Broad ]
GenevisibleExpression of TMED7-TICAM2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100302736
GTEX Portal (Tissue expression)TMED7-TICAM2
Human Protein AtlasENSG00000251201-TMED7-TICAM2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TMED7-TICAM2
Human Protein Atlas [tissue]ENSG00000251201-TMED7-TICAM2 [tissue]
Protein Interaction databases
BioGRIDTMED7-TICAM2
STRING (EMBL)TMED7-TICAM2
ZODIACTMED7-TICAM2
Ontologies - Pathways
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMED7-TICAM2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:25:42 CEST 2021

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.