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TMED8 (transmembrane p24 trafficking protein family member 8)

Identity

Alias_namesFAM15B
family with sequence similarity 15, member B
transmembrane emp24 domain containing 8
transmembrane emp24 protein transport domain containing 8
Other alias
HGNC (Hugo) TMED8
LocusID (NCBI) 283578
Atlas_Id 74767
Location 14q24.3  [Link to chromosome band 14q24]
Location_base_pair Starts at 77335021 and ends at 77377109 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMED8   18633
Cards
Entrez_Gene (NCBI)TMED8  283578  transmembrane p24 trafficking protein family member 8
AliasesFAM15B
GeneCards (Weizmann)TMED8
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr14:77335021-77377109 [Contig_View]  TMED8 [Vega]
TCGA cBioPortalTMED8
AceView (NCBI)TMED8
Genatlas (Paris)TMED8
WikiGenes283578
SOURCE (Princeton)TMED8
Genetics Home Reference (NIH)TMED8
Genomic and cartography
GoldenPath hg38 (UCSC)TMED8  -     chr14:77335021-77377109 -  14q24.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMED8  -     14q24.3   [Description]    (hg19-Feb_2009)
EnsemblTMED8 - 14q24.3 [CytoView hg19]  TMED8 - 14q24.3 [CytoView hg38]
Mapping of homologs : NCBITMED8 [Mapview hg19]  TMED8 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK025695 AK026855 AK095650 AY598329 BC101510
RefSeq transcript (Entrez)NM_001346131 NM_001346133 NM_001346134 NM_213601
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMED8
Cluster EST : UnigeneHs.200413 [ NCBI ]
CGAP (NCI)Hs.200413
Gene ExpressionTMED8 [ NCBI-GEO ]   TMED8 [ EBI - ARRAY_EXPRESS ]   TMED8 [ SEEK ]   TMED8 [ MEM ]
Gene Expression Viewer (FireBrowse)TMED8 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)283578
GTEX Portal (Tissue expression)TMED8
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6PL24   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6PL24  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6PL24
Splice isoforms : SwissVarQ6PL24
PhosPhoSitePlusQ6PL24
Domaine pattern : Prosite (Expaxy)GOLD (PS50866)   
Domains : Interpro (EBI)GOLD_dom   
Domain families : Pfam (Sanger)GOLD_2 (PF13897)   
Domain families : Pfam (NCBI)pfam13897   
Conserved Domain (NCBI)TMED8
DMDM Disease mutations283578
Blocks (Seattle)TMED8
SuperfamilyQ6PL24
Peptide AtlasQ6PL24
HPRD18201
IPIIPI00292812   IPI00984772   
Protein Interaction databases
DIP (DOE-UCLA)Q6PL24
IntAct (EBI)Q6PL24
BioGRIDTMED8
STRING (EMBL)TMED8
ZODIACTMED8
Ontologies - Pathways
QuickGOQ6PL24
Ontology : AmiGOtransport  integral component of membrane  
Ontology : EGO-EBItransport  integral component of membrane  
NDEx NetworkTMED8
Atlas of Cancer Signalling NetworkTMED8
Wikipedia pathwaysTMED8
Orthology - Evolution
OrthoDB283578
Phylogenetic Trees/Animal Genes : TreeFamTMED8
HOVERGENQ6PL24
HOGENOMQ6PL24
Homologs : HomoloGeneTMED8
Homology/Alignments : Family Browser (UCSC)TMED8
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMED8 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMED8
dbVarTMED8
ClinVarTMED8
1000_GenomesTMED8 
Exome Variant ServerTMED8
ExAC (Exome Aggregation Consortium)TMED8 (select the gene name)
Genetic variants : HAPMAP283578
Genomic Variants (DGV)TMED8 [DGVbeta]
DECIPHERTMED8 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMED8 
Mutations
ICGC Data PortalTMED8 
TCGA Data PortalTMED8 
Broad Tumor PortalTMED8
OASIS PortalTMED8 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMED8  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTMED8
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TMED8
DgiDB (Drug Gene Interaction Database)TMED8
DoCM (Curated mutations)TMED8 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMED8 (select a term)
intoGenTMED8
Cancer3DTMED8(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTMED8
Genetic Testing Registry TMED8
NextProtQ6PL24 [Medical]
TSGene283578
GENETestsTMED8
Target ValidationTMED8
Huge Navigator TMED8 [HugePedia]
snp3D : Map Gene to Disease283578
BioCentury BCIQTMED8
ClinGenTMED8
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD283578
Chemical/Pharm GKB GenePA134948632
Clinical trialTMED8
Miscellaneous
canSAR (ICR)TMED8 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMED8
EVEXTMED8
GoPubMedTMED8
iHOPTMED8
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:45:45 CEST 2017

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