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TMEM101 (transmembrane protein 101)

Identity

Alias_symbol (synonym)MGC4251
FLJ23987
Other alias-
HGNC (Hugo) TMEM101
LocusID (NCBI) 84336
Atlas_Id 74769
Location 17q21.31  [Link to chromosome band 17q21]
Location_base_pair Starts at 44011188 and ends at 44023151 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM101   28653
Cards
Entrez_Gene (NCBI)TMEM101  84336  transmembrane protein 101
Aliases
GeneCards (Weizmann)TMEM101
Ensembl hg19 (Hinxton)ENSG00000091947 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000091947 [Gene_View]  chr17:44011188-44023151 [Contig_View]  TMEM101 [Vega]
ICGC DataPortalENSG00000091947
TCGA cBioPortalTMEM101
AceView (NCBI)TMEM101
Genatlas (Paris)TMEM101
WikiGenes84336
SOURCE (Princeton)TMEM101
Genetics Home Reference (NIH)TMEM101
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM101  -     chr17:44011188-44023151 -  17q21.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM101  -     17q21.31   [Description]    (hg19-Feb_2009)
EnsemblTMEM101 - 17q21.31 [CytoView hg19]  TMEM101 - 17q21.31 [CytoView hg38]
Mapping of homologs : NCBITMEM101 [Mapview hg19]  TMEM101 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB097008 AI420766 AK130810 AK172826 AK294237
RefSeq transcript (Entrez)NM_001304813 NM_001304814 NM_032376
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM101
Cluster EST : UnigeneHs.514211 [ NCBI ]
CGAP (NCI)Hs.514211
Alternative Splicing GalleryENSG00000091947
Gene ExpressionTMEM101 [ NCBI-GEO ]   TMEM101 [ EBI - ARRAY_EXPRESS ]   TMEM101 [ SEEK ]   TMEM101 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM101 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84336
GTEX Portal (Tissue expression)TMEM101
Human Protein AtlasENSG00000091947-TMEM101 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96IK0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96IK0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96IK0
Splice isoforms : SwissVarQ96IK0
PhosPhoSitePlusQ96IK0
Domains : Interpro (EBI)TMEM101   
Domain families : Pfam (Sanger)TMEM101 (PF15111)   
Domain families : Pfam (NCBI)pfam15111   
Conserved Domain (NCBI)TMEM101
DMDM Disease mutations84336
Blocks (Seattle)TMEM101
SuperfamilyQ96IK0
Human Protein Atlas [tissue]ENSG00000091947-TMEM101 [tissue]
Peptide AtlasQ96IK0
HPRD14623
IPIIPI00063666   IPI01009613   
Protein Interaction databases
DIP (DOE-UCLA)Q96IK0
IntAct (EBI)Q96IK0
FunCoupENSG00000091947
BioGRIDTMEM101
STRING (EMBL)TMEM101
ZODIACTMEM101
Ontologies - Pathways
QuickGOQ96IK0
Ontology : AmiGOsignal transducer activity  cellular_component  signal transduction  integral component of membrane  positive regulation of I-kappaB kinase/NF-kappaB signaling  
Ontology : EGO-EBIsignal transducer activity  cellular_component  signal transduction  integral component of membrane  positive regulation of I-kappaB kinase/NF-kappaB signaling  
NDEx NetworkTMEM101
Atlas of Cancer Signalling NetworkTMEM101
Wikipedia pathwaysTMEM101
Orthology - Evolution
OrthoDB84336
GeneTree (enSembl)ENSG00000091947
Phylogenetic Trees/Animal Genes : TreeFamTMEM101
HOVERGENQ96IK0
HOGENOMQ96IK0
Homologs : HomoloGeneTMEM101
Homology/Alignments : Family Browser (UCSC)TMEM101
Gene fusions - Rearrangements
Fusion: Tumor Portal TMEM101
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM101 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM101
dbVarTMEM101
ClinVarTMEM101
1000_GenomesTMEM101 
Exome Variant ServerTMEM101
ExAC (Exome Aggregation Consortium)ENSG00000091947
GNOMAD BrowserENSG00000091947
Genetic variants : HAPMAP84336
Genomic Variants (DGV)TMEM101 [DGVbeta]
DECIPHERTMEM101 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM101 
Mutations
ICGC Data PortalTMEM101 
TCGA Data PortalTMEM101 
Broad Tumor PortalTMEM101
OASIS PortalTMEM101 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM101  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTMEM101
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TMEM101
DgiDB (Drug Gene Interaction Database)TMEM101
DoCM (Curated mutations)TMEM101 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM101 (select a term)
intoGenTMEM101
Cancer3DTMEM101(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTMEM101
Genetic Testing Registry TMEM101
NextProtQ96IK0 [Medical]
TSGene84336
GENETestsTMEM101
Target ValidationTMEM101
Huge Navigator TMEM101 [HugePedia]
snp3D : Map Gene to Disease84336
BioCentury BCIQTMEM101
ClinGenTMEM101
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84336
Chemical/Pharm GKB GenePA142670750
Clinical trialTMEM101
Miscellaneous
canSAR (ICR)TMEM101 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM101
EVEXTMEM101
GoPubMedTMEM101
iHOPTMEM101
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 12:32:37 CET 2017

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